Allochromatium vinosum: Alvin_1603
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Entry
Alvin_1603 CDS
T01168
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
alv
Allochromatium vinosum
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alv03016
]
Alvin_1603
Enzymes [BR:
alv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Alvin_1603
Transfer RNA biogenesis [BR:
alv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Alvin_1603
Prokaryotic type
Alvin_1603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADC62536
UniProt:
D3RTM7
LinkDB
All DBs
Position
complement(1862634..1863419)
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AA seq
261 aa
AA seq
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MGVEYDGTHFHGWQTQSGVRTVQSELEAAVSRVANHPVIVHCAGRTDAGVHALEQVVHFE
TTATRSERSWVLGANVNLPPDVGVRWAHPVDDGFHARFSAQARHYRYQILARRTRSPIQR
DRAVWVHEALDLERMRIAAVALVGEHDFSSFRAVACQAKSPIRRVLYLDLSEREGLITLA
IGANGFLHHMVRNIAGVLMAIGRGEASVDWTRELLEVRDRRLGGVTAQPQGLYFVRADYP
AEFGLPQSERADPLQRLKNSI
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgtcgagtacgacggcacccacttccacggctggcagacgcaatccggagtacgg
accgtgcagtccgagctggaagcggccgtctcgcgggtcgcgaatcatcccgtgatcgtg
cactgtgccggacgaaccgatgccggtgtccatgcgctcgaacaggtggtgcatttcgag
actacggccacgcgcagcgagcggtcctgggtgctgggtgccaatgtcaatctgccgccc
gatgtcggcgtgcgctgggcgcatccggtcgatgacggctttcatgcgcgcttcagtgct
caggcccggcactaccgctatcagatcctggcgcggcgcacccgctcgccgatccagcgc
gatcgtgccgtctgggtgcatgaggcgctggatctggaacggatgcgcatcgccgccgtc
gcgctggtcggcgagcacgacttttcgagcttccgcgcggtggcctgtcaggccaagagt
ccgatccggcgcgtgctctatctggatctcagcgagcgcgaggggctgatcacgctggcg
atcggcgccaatggcttcctgcatcacatggtgcgcaacatcgccggggtgctgatggcc
atcgggcgcggcgaggcgtcggtcgactggacgcgcgagctgctggaggtccgcgaccgg
cgactcggcggcgtgacagcccagccgcagggactctatttcgtccgcgccgactatccg
gccgagttcggactgccacagagtgagcgtgccgatccgctccagcgtttgaagaattcg
atttga
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