Allochromatium vinosum: Alvin_1644
Help
Entry
Alvin_1644 CDS
T01168
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
alv
Allochromatium vinosum
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alv03032
]
Alvin_1644
03036 Chromosome and associated proteins [BR:
alv03036
]
Alvin_1644
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_1644
DNA replication proteins [BR:
alv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Alvin_1644
Chromosome and associated proteins [BR:
alv03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Alvin_1644
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Alvin_1644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Adeno_E1A
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ADC62576
UniProt:
D3RTR7
LinkDB
All DBs
Position
complement(1908074..1908436)
Genome browser
AA seq
120 aa
AA seq
DB search
MTKSELIDILAADQDHLPYKDVEEAVRKILERMSTALATGERIEIRGFGSFSLHYRPPRI
GRNPKTGESVALAAKHVPHFKPGKELRDRVNLAFQDSQSPDSAVSSDDGDERRIPMSALG
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatcggagctgatcgacattctggccgccgaccaggaccatctcccttacaaa
gacgtcgaggaggcggtcagaaagatcctcgagcgcatgagcacggcgctcgctaccggg
gagcggatcgagatccgggggttcggcagtttctcgctgcattaccgcccgccacgcatc
ggacgcaatcccaagacgggtgagtcggtcgccctggccgccaaacacgtcccgcacttc
aagccgggcaaggaactgcgcgatcgcgtcaacctggccttccaggattctcagtcgcct
gattccgctgtttcgtccgatgacggcgatgagcggcgtatcccgatgtcggccctcggc
tga
DBGET
integrated database retrieval system
