Allochromatium vinosum: Alvin_1987
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Entry
Alvin_1987 CDS
T01168
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
alv
Allochromatium vinosum
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alv03032
]
Alvin_1987
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_1987
Enzymes [BR:
alv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Alvin_1987
DNA replication proteins [BR:
alv03032
]
Prokaryotic type
DNA Topoisomerases
Alvin_1987
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Alvin_1987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Intein_splicing
Hint
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
ADC62911
UniProt:
D3RUQ2
LinkDB
All DBs
Position
complement(2281450..2285610)
Genome browser
AA seq
1386 aa
AA seq
DB search
MPDFAKEVLPINLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMHEQGNVWN
RAYRKSARVVGDVMGKYHPHGDAAIYDTMVRMAQPFSLRNLLVDGQGNFGCFTGDTAIKL
ADGTEKTFAELAQLPPNEIFYVYAVDKTGKIVIAEGRHARLTRPDAELLELTLDTGDVVR
CTPDHRFMLRDGSYKEAQDLTPDDSLMPGVFDTAPVKPGLNEYLRILQPNLGQYQFVHHL
ADEFNAERGQCDDVQGPFVRHHRNFDRWDNTPSNIQRLTFLEHLHLHAEQLGELWKDPDF
REAQKRGVQTYYSQHPEVVEERRERFIRQNQDEHFRQLNAARTSEGLQHYYAEHPEACAA
IAERMRLLWQDADYREKMSSVLSGIQKRPLSDEEQAGIRAIIAEKSRRMWGDDDKREEIV
AAICRAMASDSIRKKISEAVKRQWQDPEYRAKFPADHFSRMAHRFWDKPEAREIHREKIS
KQWESAEFIQAQKQAVIDSNARRLRENPDLMQDINRKAVESLRTNWKAPEYRRQVMRRKI
AGYVYDLTKRFPDCDVTPELYESNRQQNWIPRLNKAVEYFGDFDALVTAGRHYNHRVVSQ
RRLTERADTYDITVDHHHNFLLACGVFVHNSVDGDPPAAMRYTEVRMTRIADTLLDDLDK
ETVDFVPNYDNTEHEPSVLPARFPNLLVNGSSGIAVGMATNIPPHNLREVIDACLAIIDN
PLVSLDELMEIVPGPDFPTAGLINGVRGIREAYRTGRGRCVMRARATTETQKRSGREAIV
ITEIPYQVNKARLLERIAELVKEKKIEGIAQDGLRDESDKDGMRIVIELKRDTHSEVLLN
NLYQHTQLQQVFGINMVALVDGQPLTLNLKQILEYFLRHRRDVVTRRTLYELRKARDRAH
VLEGYAIALANIDEVIATIKAAANPAEARERLMERHWAPGAVTGMLERAGADRTRPEELE
ACFGLSDAGYRLSERQAKAILDLQLHRLTGLEQDKILKEFEEILATIAALLLILSDPDRL
MEVIREELIAVRDQFGDERRTEIQLDQTDLTLEDLIAPEDRVVTLSHQGYVKTQPISDYQ
AQKRGGKGKSATAIKEEDFIDRIFVANSHDTVLCFSSRGRVYWLKVYELPQAGRGARGRP
MVNLLPLEAGERITTLLPVRDYEDGSFVFMATSAGTVKKTPLKDFSRPLSRGIIAIDLRE
DELLVGATITGGEQDLMLFTSAGKAVRFSESHVRSMGRAAHGVRGVMLQEGQRVIALVAP
EDGGTVLSVTENGYGKRTDVDQFPTKGRGTQGVIAIDTAERNGAQVGAILVHPGDEIMLI
ADDGTLIRTSVDQIPVVGRNTKGVKLINLGEGQRLVFVERIAALEGDKETGEEAAEDSEA
SVADDA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgccagatttcgccaaagaagtcctgcccatcaatctcgaagacgagatgcgtcagtcc
tacctcgattacgccatgagtgtgatcgtgggccgcgccctgccggatgtccgcgatggt
ctcaagccggtgcaccggcgcgtcctcttctccatgcacgagcagggcaacgtctggaac
cgggcctatcgcaaatcggcgcgcgtggtcggcgacgtcatgggtaagtatcacccccac
ggcgatgcggccatctacgacaccatggtgcgcatggcccagccgttctcgctgcgcaat
ctgctcgtcgacggtcagggcaacttcggctgcttcaccggcgatacggccatcaagctg
gctgacggcaccgagaagacgttcgccgagttggcgcaactgccgccaaacgaaatcttt
tatgtctatgcagtcgacaagaccggcaagatcgtcatcgccgaagggcgtcatgcgcgc
ctgacccgccccgacgccgagcttctggagctcacgctcgacactggcgatgtcgtccgt
tgcacgcccgatcatcgtttcatgctgcgcgatggctcctacaaggaagcgcaggacttg
acgccggacgacagcctcatgcctggggtcttcgatacagctccagtcaagcccggactg
aacgagtatctgcgcatcctccagccgaatcttgggcagtatcagttcgttcatcatctg
gccgacgagttcaatgccgaacgcgggcaatgtgatgatgtacagggaccgttcgttaga
catcaccggaacttcgatcgctgggacaatactccatcgaatatccagcgtttgacattc
cttgaacacttgcatctgcacgctgagcaactcggcgaactctggaaggatccggatttc
cgcgaggcacagaagcgtggagtgcagacctactattcgcaacaccccgaggttgttgaa
gagcggcgcgagcgcttcattcgtcagaaccaggacgaacatttcaggcagctgaatgcc
gcgcgcacttcggaagggttgcagcattattatgccgagcacccggaagcgtgtgcggcg
attgccgaacggatgcgcctgttgtggcaggatgccgattatcgcgaaaagatgtccagt
gtgctgtccggcatccaaaaacgcccactttcggatgaggaacaggccggtatccgtgcc
atcatcgcggaaaaaagccggcgcatgtggggtgacgacgacaagcgtgaagagatcgtt
gcggcgatttgccgcgccatggcctccgacagtattcgtaagaaaatcagcgaggccgtc
aagcgtcagtggcaagatcctgaatatcgagcaaaatttccagccgatcatttctcgcgc
atggcacacaggttctgggacaagccggaagctcgtgagatccatcgcgaaaaaatttcc
aagcagtgggaatccgctgaattcatccaggctcagaagcaggctgtcatcgacagcaat
gcacgccgattacgcgaaaatcctgatttgatgcaggatatcaaccgtaaagcggtcgag
tccttgcgaacgaattggaaagcgcctgaatatcgccggcaggtgatgcggcgtaagatc
gcgggttatgtttatgatctgaccaagcgattccctgactgtgatgtcacccccgaactg
tacgaatcgaatcgccagcagaattggattccgcgcctgaacaaggccgtcgagtatttc
ggcgactttgatgcactcgttacggcgggcagacattataaccatcgggttgtcagtcaa
cgtcgactcaccgagcgcgcggacacttacgacatcacggtcgatcaccatcacaatttc
ctgctggcgtgcggtgtcttcgtccataactcggtcgatggcgatccaccggccgccatg
cgttacaccgaagtgcgcatgacgcgcatcgccgacaccctgctcgacgatctggacaag
gaaacggtcgatttcgtcccgaactatgacaacaccgagcacgagccctcggtcctgccg
gcgcgctttccgaatctgctggtcaacggctcatccggcatcgccgtcggcatggcgacc
aacatccccccgcacaatctgcgcgaggtcatcgacgcctgtctggcgatcatcgacaac
ccgctggtgtcgctcgacgagctgatggagatcgtgcccggaccggacttcccgaccgcc
ggactcatcaacggggtgcgcggcatccgcgaagcctaccgcaccggacgcggccgctgc
gtgatgcgcgcccgcgccacgaccgagacccagaagcgtagcggacgcgaggcgatcgtc
atcaccgagatcccttatcaggtcaacaaggcgcggctgctggagcgcatcgccgaactg
gtcaaggagaagaagatcgagggcatcgcccaggacggtctgcgcgacgagtccgacaag
gacgggatgcgcatcgtcatcgaactcaagcgcgacacccactccgaggtgctgctcaac
aacctctatcagcacacccagctccagcaggtgttcggcatcaacatggtcgcgctggtc
gacggccagccgctgacgctcaacctcaagcagatcctcgaatacttcctgcgccaccgc
cgcgacgtcgtcacacgccgcaccctctatgaactgcgcaaggcgcgcgaccgagcgcat
gtgctggaaggctatgccatcgcgctggccaacatcgacgaggtgattgcgaccatcaag
gccgccgccaatcccgccgaggcccgcgagcggctgatggagcgccactgggcgcccggc
gccgtcaccggaatgctggaacgcgccggggccgaccgcacccgtccggaagaactcgaa
gcctgcttcggactcagcgacgccggctatcggttgagcgagcgtcaggccaaggcgatc
ctggatctgcaactgcaccgcctgaccgggctggagcaggacaagatcctcaaggagttc
gaagagattctggcgaccatcgccgcgctgctcttgatcctctccgatccggatcggctg
atggaggtcatccgcgaggaactgatcgccgtgcgcgaccagttcggcgacgagcgccgc
accgagatccagctcgaccaaacggatctgaccctggaggatttgatcgcgcccgaggat
cgcgtggtcacgctctcgcatcagggctacgtcaagacgcagccgatcagcgactatcag
gcccaaaagcgcggtggcaagggcaagagcgccaccgcgatcaaggaagaggacttcatc
gaccgcatcttcgtcgccaactcgcacgataccgtgctctgcttctccagccgcgggcgg
gtctactggctcaaggtctacgagttgccgcaggccggacgcggcgcgcgcgggcgaccc
atggtcaatctgctgccgctggaagctggcgagcgcatcaccaccctgctgccggtacgc
gactacgaggacggctccttcgtgttcatggccaccagcgccggcacggtcaagaagacc
ccgctcaaggacttctcgcgtccgctctcgcgcggcatcatcgccatcgacctgcgtgaa
gacgagctgctggtcggcgcgaccatcaccggcggcgagcaggatctgatgctcttcacc
tcggcgggcaaggcggtgcgcttctccgagagccatgtccgctcgatgggacgcgcagcg
catggtgtgcgcggcgtgatgctccaggagggacagcgggtgatcgccctggtcgcgccc
gaggacggcggcaccgtgctcagcgtcaccgagaacggctatggcaagcgcaccgacgtc
gatcagtttccgaccaaggggcgtggcacccagggcgtgatcgccatcgacaccgctgag
cgtaacggcgctcaggtcggcgcgatcctggtccatccgggcgacgagatcatgctgatc
gccgacgacggcactctgatccgcacctcggtcgatcagatcccggtggtcggacgcaat
accaagggcgtcaaactgatcaatctcggcgagggccagcgactggtcttcgtcgaacgc
atcgccgccctggagggcgacaaggaaacgggcgaggaggccgccgaggacagcgaggcg
tccgtggcggacgacgcctag
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