Allochromatium vinosum: Alvin_2015
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Entry
Alvin_2015 CDS
T01168
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
alv
Allochromatium vinosum
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alv03009
]
Alvin_2015
Enzymes [BR:
alv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Alvin_2015
Ribosome biogenesis [BR:
alv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Alvin_2015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
RrnaAD
PCMT
MTS
Methyltransf_11
Methyltr_RsmB-F
Methyltransf_23
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_4
Yop-YscD_ppl_3rd
Methyltransf_15
PrmA
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ADC62939
UniProt:
D3RV07
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Position
complement(2311759..2313081)
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AA seq
440 aa
AA seq
DB search
MSRKPKTLPAPIEAEIQTLTHEGRGLTRVDGKTVFVDGALPGERVRLRYTRVQRRFDEAE
VEEVLTASPDRIEPKCAHFGVCGGCALQHLNPEAQIRVKHDSLADVFERIGKVTPERWLD
PLTAESWGYRRKARLGVRHVVKKGRTLVGFRERRNSFLADLRRCEVLHPQVGERLETLAA
TIETLSIRDHVPQIEMAMGDGPCVLVFRVMQTPTPEDEARLLELGQREGFHIYLQDGGID
SIRPLPGQEVALSYSLPNHGVEIGFLPSDFTQVNLELNRRMVDQALDLLAPESDDAVLDL
FCGLGNFTLPLARRSAEVVGVEGDAGLVERACANAERNGLTNVQFHVADLQAELSTAAPW
TQQRFTKALIDPPRSGAWEVLDWLPRLGVERLVYVSCYPTTLARDADRLVNELGYRLRAA
GVMDMFPHTSHVESMALFER
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagaaaacccaaaacgctccccgcgcccatcgaggccgagatccaaaccctgacc
catgaaggccgcggcctgacccgcgtcgacggcaagaccgtgttcgtcgatggcgcactg
cccggcgagcgcgtgcgcctgcgctatacccgcgtccagcgccgcttcgatgaggccgag
gtcgaggaagtgctcacggcctcgcccgaccgcatcgagccgaagtgcgcccacttcggc
gtctgcggcggctgcgcgctccagcatctgaaccccgaggcccagatccgcgtcaagcac
gacagtctggccgacgtcttcgaacgcatcggcaaggtgacgcccgaacgctggctcgac
ccgctcaccgccgagtcctggggctatcgacgcaaggcgcggctcggcgtgcgtcatgtc
gtcaagaaggggcgcaccctggtcggctttcgcgagcgtcgcaacagcttcctggccgat
ctgcgccgctgcgaggtgctgcacccgcaggtcggcgagcgcctggagacgctggcggcg
accatcgagaccctgagcatccgcgaccacgtcccccagatcgagatggccatgggtgat
ggtccctgtgtgctggtgttccgcgtcatgcagacgccgacgcccgaggacgaggcgcgt
ctgctcgaactcggccaacgcgaaggcttccacatctatctccaggacggcggcatcgac
agcatccgcccgctcccaggccaggaggtcgcgctgagctacagcctgccgaaccacggc
gtcgagatcggcttcctgccaagcgacttcacccaggtcaatctggagctcaaccggcgc
atggtcgatcaggcgctcgatctgctcgcccccgagtcggacgacgcggtgctggatctg
ttctgcggactgggcaacttcaccctgccgctggcgcgccgttcggctgaggtggtgggc
gtggaaggcgatgccggactggtcgagcgcgcgtgcgccaacgcggagcgcaatgggctg
accaacgtgcagttccacgtcgctgacctccaggccgaactgagcaccgccgcaccctgg
acccaacaacgcttcaccaaggccctgatcgacccgccgcgcagtggcgcctgggaggtg
ctcgactggctgccgcgtctgggcgtggagcgtctggtctatgtctcctgctacccgacc
accctggcgcgcgacgccgaccgcctggtcaacgaactcggctatcgactgcgcgcggcg
ggcgtgatggacatgttcccgcacaccagccacgtcgagtcgatggcgctcttcgaacgg
tga
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