Allochromatium vinosum: Alvin_2062
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Entry
Alvin_2062 CDS
T01168
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
alv
Allochromatium vinosum
Pathway
alv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Alvin_2062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_2062
Enzymes [BR:
alv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Alvin_2062
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Alvin_2062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADC62984
UniProt:
D3RV52
LinkDB
All DBs
Position
complement(2363507..2364343)
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AA seq
278 aa
AA seq
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MLKIVSFNINGVRARPHQVEALKAGLDPDILALQESKVADEQFPLDWARGLGYDVRIHGQ
KGHYGVALLSKQSPHSVVKGLPNDDAEAQRRLILGQYRLADGDEVTVINGYFPQGEGRDH
PLKFPAKQQFYAGLLDYLRTAFRPDQNIVLLGDMNVAPLDLDIGIGADNAKRWLRTGKCA
FLPEEREWFQALLDWGLIDAYRTRHPETADRFSWFDYRSRGFEREPKHGLRIDHILISAP
LRERLIDVGIDYAIRAMDKPSDHCPVWITLDLADLTAA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaagatcgtctcgttcaacatcaacggcgtccgcgcccgtccgcatcaggtcgag
gcgctcaaggccggactcgaccccgacatcctcgccctgcaggaatccaaggtcgccgac
gagcagtttccgctcgattgggcgcgcggactgggctatgacgtccggattcacggtcaa
aagggacactatggcgtggcgctcctgagcaaacagtctccgcacagcgtcgtcaaggga
ctgccgaacgacgacgccgaagcccagcgtcggttgatactaggccaatatcggctcgcc
gacggtgacgaagtcacggtcatcaacggctacttcccgcaaggcgaaggccgcgaccat
ccgctgaagttccccgccaagcagcagttctatgccggcctgctggactatctgcgcacc
gccttccgcccggaccagaacatcgtcctgctcggcgacatgaacgtcgcccccctggat
ctggatatcgggatcggcgccgacaacgccaaacgctggctgcgcaccgggaaatgcgcc
ttcctgcccgaggagcgtgagtggttccaggccctgctcgactgggggctgatcgatgcc
taccgcactcgccatcccgaaaccgccgaccgcttcagctggttcgactaccgctcgcgc
ggcttcgagcgcgagccgaaacatggtctgcgcatcgaccatatcctgatctcggccccg
ctgcgcgagcggctgatcgacgtcggtatcgactatgccatccgggcgatggacaaaccc
tccgaccattgcccggtgtggatcaccctggatctcgccgatctcacagcggcctga
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