Allochromatium vinosum: Alvin_2087
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Entry
Alvin_2087 CDS
T01168
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
alv
Allochromatium vinosum
Pathway
alv00300
Lysine biosynthesis
alv00470
D-Amino acid metabolism
alv01100
Metabolic pathways
alv01110
Biosynthesis of secondary metabolites
alv01120
Microbial metabolism in diverse environments
alv01230
Biosynthesis of amino acids
Module
alv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Alvin_2087
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Alvin_2087
Enzymes [BR:
alv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Alvin_2087
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ADC63009
UniProt:
D3RV77
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All DBs
Position
2392128..2393399
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AA seq
423 aa
AA seq
DB search
MDHFNDRDGLLHAEEVPLTEIAERFGTPCYVYSRATLERHWRAFERAFRDHPHLICFSVK
SNSNLAVLNVLARLGSGFDIVSVGELERVLAAGGDPARVVFSGVGKRADEIRRALEVGIR
CFNVESESELTRIDRIAGELGVRAPVSLRVNPDVDPQTHHYISTGLKENKFGIDIQEAES
VYALAAAMPNLKVVGIDCHIGSQLTDLAPFIDALGRVLALADRLCASGIAIEHLDLGGGL
GIRYREEHPPEPAAYAAAMSHLLADRPYEVILEPGRAIVGNAGVLLTQVEYLKHGPHKHF
AILDAAMNDLLRPALYQAGHEIVRVVQETDADPSRYDLVGPVCETGDFLGKDRTLALEEG
DLVAVRGAGAYGFTMSSNYNSRPRAAEVMVDGDRAYLVRAREQVADLYAGEQLLPSETPD
AAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatcacttcaatgaccgcgacggactcctccacgccgaggaggtgccgctcaccgag
atcgccgagcgcttcggcacgccctgctacgtctattcgcgcgccacgctcgaacgccac
tggcgcgccttcgagcgcgcctttcgcgatcatccgcacctgatctgcttctcggtcaag
tccaactccaacctcgcggtcctgaacgtgctcgcgcggctgggttccggcttcgacatc
gtttcggtcggcgagctggagcgggtgctggccgccggcggcgatccggccagggtcgtc
ttctcgggcgtgggcaagcgcgccgacgagatccggcgcgcgctggaggtcggcatccgc
tgcttcaacgtcgagtccgagtccgagctgacccggatcgaccggatcgccggtgaactc
ggggtccgggcgccggtgtcgctgcgcgtcaacccggacgtcgatccccagacccatcac
tacatctccaccggcctgaaggagaacaagttcggcatcgacatccaggaggccgagtcg
gtctatgcgctggctgccgcgatgccgaacctgaaggtcgtcggcatcgactgtcacatc
ggctcgcagttgacggatctggcgcccttcatcgacgcgctcgggcgggtgctggcgctg
gccgaccggctgtgcgcctcggggatcgccatcgagcatctggatctcggcggcggactc
ggcatccgttatcgtgaggagcatccgccggaaccggccgcctatgccgccgccatgagc
catctgctggccgatcgtccgtatgaagtgatcctggagccgggacgcgccatcgtcggc
aatgccggtgtgctgctgacgcaggtcgagtatctcaagcacgggccgcacaagcatttc
gccatcctcgatgcggccatgaacgacctgctgcgtccggcgctctatcaggctggtcac
gagatcgtgcgcgttgttcaggagaccgacgccgatccgagccgttacgatctggtcggc
ccggtgtgcgagacgggagactttctcggcaaggaccgcaccctggcgctcgaagaaggc
gatctggtcgcggtgcgcggcgccggggcctatggcttcaccatgagctccaactacaac
agccgtccgcgcgccgccgaggtcatggtcgacggcgaccgggcctatctggtgcgcgcg
cgcgagcaggtcgccgatctctacgcgggcgagcagttgctgccgtccgagacgcccgac
gccgccgcatga
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