Allochromatium vinosum: Alvin_2335
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Entry
Alvin_2335 CDS
T01168
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
alv
Allochromatium vinosum
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alv03009
]
Alvin_2335
Enzymes [BR:
alv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Alvin_2335
Ribosome biogenesis [BR:
alv03009
]
Prokaryotic type
rRNA helicases
Alvin_2335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADC63252
UniProt:
D3RMW4
LinkDB
All DBs
Position
2663858..2665222
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AA seq
454 aa
AA seq
DB search
MNTHFSEFLLPDALMRGLANEGYTTPTPVQAQVIPLAMDGVDLLVSAATGSGKTAAFLLP
IMQRFIDVPRHDGSTRALILVPTRELARQIHIHFMRLGSYTRLTSGVITGGESKAHQIAT
LRKNPEILVATPGRLLEFLETGQANLRDLEFLVLDEADRMLDMGFADDVLAIIRYSRPER
QSLLFSATLEQRGLSQITERLLRDPQRVDVDPVRQQHPDIAHCMLLSDGLEHKQQQLLWL
LRHETYEKALIFTNTREGAVALGNFLQGQQQRVAVLHGELDQRERNRVMGLLHSGRVNTL
IATDLAARGIDVPGVQRVFNFDLPRRGDDYLHRTGRTGRAGEAGVAISLVGPPEWNRMES
IARYLNLTFEPREIEGLKASFKGPTKRNKPSKPAATSGKRKSTAAAEEKPRKKERLRDRK
NIGKRRVPTSAKAQEAGHAPLTRRAREHAKPDAD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacttctctgaattcctccttcccgacgcgctcatgcgcggtttggccaac
gaaggctatacgaccccgaccccggtccaggcccaggtgatcccgctggcgatggacggc
gtcgacctgctggtctcagcggccaccggctcaggcaagacggcggccttcctgctgccg
atcatgcagcgcttcatcgacgtgccgcgccacgatggcagcacccgcgccctgatcctg
gtgccgacccgcgagctggcgcgtcagatccatatccatttcatgcgcctgggaagctac
acgcgcctgaccagcggcgtcatcaccggcggcgagtccaaagcccatcagatcgcgacc
ctgcgcaaaaatcccgagatcctggtggccacaccgggacgcctgctcgaattcctggag
acgggtcaggcaaacctgcgcgacctggagttcctcgtgctcgacgaggccgaccgcatg
ctcgacatgggctttgccgacgacgtgctggcgatcatccgttacagccgtcccgagcgc
cagtcgctgctgttctcggcgacgcttgagcagcggggtctgagtcagatcaccgagcgt
ctgctgcgcgatccgcagcgggtcgatgtcgatccggtccgccaacagcatccggacatc
gcgcattgcatgttgctgagcgatgggctggaacacaaacaacagcaactgctgtggttg
ctgcgccatgagacctatgaaaaggccctgatcttcaccaacacccgcgagggggccgtg
gcgctgggcaacttcctccaaggccaacagcagcgggttgccgtgctgcatggcgaactc
gatcaacgtgagcgcaaccgcgtcatgggcctgctgcacagcgggcgtgtgaatacgctc
atcgcgaccgacctggcggcgcgcggcattgatgtaccgggcgtgcagcgggtgttcaat
ttcgacctgccgcgccggggggacgactatctgcatcgtaccggacgcaccggacgcgcg
ggtgaggcgggcgtggccatctcgctggtcggcccgcccgaatggaatcggatggaaagc
atcgcgcgctatctcaacctgaccttcgagccgcgcgagattgaaggactcaaggccagc
ttcaagggaccgacaaagcgcaacaaaccgagcaagccggccgcgacgagcggcaagcgc
aagtccacagccgccgcggaagagaaaccgcgcaagaaggagcgtctgcgcgaccgcaag
aacatcggcaaacggcgcgtgcccacgagcgccaaggcgcaagaggccggccatgcgccg
ctgacacggcgcgcacgcgagcatgccaagccggacgcggactga
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