Allochromatium vinosum: Alvin_2338
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Entry
Alvin_2338 CDS
T01168
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alv
Allochromatium vinosum
Pathway
alv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Alvin_2338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alv03021
]
Alvin_2338
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_2338
Enzymes [BR:
alv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Alvin_2338
Transcription machinery [BR:
alv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Alvin_2338
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Alvin_2338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF1778
AMIN-like
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
ADC63255
UniProt:
D3RMW7
LinkDB
All DBs
Position
complement(2666690..2667703)
Genome browser
AA seq
337 aa
AA seq
DB search
MTDAIGEFLKPRIVKVEQVDGNPCHSRVSLEPLERGFGHTLGNALRRILLSSMDGYAVTE
VEIQGVLHEYTTLEGVQEDVLEILLNFKQLAIVLQGKDEATFALSKRGPGPVTAADIAID
HTAEIANPELVIANLTTGGELSMTLTVRRGRGYEPASQRELEGAEDRPIGKLPIDASFSP
VRRVAIEVQSARVEQRTDLDRLVIDLETNGTIDPKETIQRAATILRDQLSSFVALEGTAP
AETQVQESRDESPYDPILLRPVDDLELTVRSANCLKAENIYLIGDLIQRTEVELLKTPNL
GKKSLTEIKDVLATRGLSLGMRLENWPPENIAELSIR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgctattggcgaatttctcaaaccgcgcatcgtcaaagtcgagcaggtcgac
ggcaacccgtgtcactcgcgggtctcgctggagccgctcgagcgcggtttcggccacacg
ctcggcaacgcgctgcggcggatcttgctgtcgtcgatggacgggtacgccgtaacggaa
gtcgagatccagggcgtattgcacgagtacaccacgctggagggtgtgcaggaggatgtg
ctcgaaatcctgctcaacttcaaacagcttgccattgtgctccagggcaaggacgaggca
acctttgcgctgagcaaacgcggtccgggaccggtgacagccgccgacatcgccatcgat
catacggctgagatcgccaaccccgagctggtgatcgccaacctgacgaccggtggcgag
ctgagcatgacgctgaccgtgcgtcgcggtcgcggctatgagccggcgagccagcgcgag
ctcgagggcgccgaggatcggccgatcggcaagctgccgatcgacgcctccttcagtccg
gtgcggcgcgtggccatcgaagtgcaatcggcgcgtgtcgaacagcgcaccgacctcgac
cggctggtgatcgatctggagaccaacggcaccatcgatccgaaagagaccatccagcgc
gcggccactatcctgcgcgatcagctgtcgagcttcgtggcgctggaaggcacggcgccg
gccgagacccaggtccaggagtcgcgcgacgagtcgccttacgatccgatcctgctgcgt
ccggtcgacgacctggagctgacggtgcgttcggccaactgcctcaaggccgagaacatc
tatctgatcggcgacctgatccagcgcaccgaggtcgagctgctcaagacgcccaacctg
ggcaagaagtcgctcaccgagatcaaggacgtgctggccacgcgcgggctgtcattgggc
atgcgtctcgagaactggccgcccgagaacatcgccgaactcagtattcgctaa
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