KEGG   Allochromatium vinosum: Alvin_2397
Entry
Alvin_2397        CDS       T01168                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
alv  Allochromatium vinosum
Pathway
alv02024  Quorum sensing
alv03060  Protein export
alv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:alv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Alvin_2397
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Alvin_2397
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Alvin_2397
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alv02044]
    Alvin_2397
Enzymes [BR:alv01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Alvin_2397
Secretion system [BR:alv02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Alvin_2397
  Eukaryotic Sec-SRP protein
   Alvin_2397
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin cobW NACHT AAA_33 KTI12 AAA_16 SRPRB T2SSE AAA_19 AAA_30 YqeC nSTAND3 APS_kinase Thymidylate_kin AAA_14 ATP_bind_1 ArsA_ATPase AAA_28 Herpes_ori_bp AAA_31 NTPase_1 ResIII SWI2_SNF2 TsaE NPHP3_N ATPase_2 TrwB_AAD_bind cas_Cpf1_2nd
Other DBs
NCBI-ProteinID: ADC63313
UniProt: D3RNE8
LinkDB
Position
complement(2720172..2721566)
AA seq 464 aa
MFENLQDRFETVLTNLRGQGRLTEDNIKDTLREVRMALLEADVALPVVRQFIEDIREQAL
GEAVTKSLTPGQVLIKIVNDELVKIMGAANERLDLAAQPPAVILMAGLQGSGKTTSVAKL
ARWLQEKQKKSVMVVSCDVYRPAAIEQLRTVAGEVGAEFCPSQGDEDPVHIAQRALESAR
KRFKDVLIVDTAGRLHVDAEMMDEIKLIHKAIKPVETLFVVDSMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRQITGKPIKFLGTGERTTALEPFHPDRVASRILGMGDV
VSLVEEVQAKVDKDQAEKLVKKLKKGKDFDLADFKEQLEQMNKMGGMMSLMEKLPGMNQI
PDHVKNKASDKEMGKLVAIINSMTPHERQFPAVIKGSRKRRIAAGSGTQVQDVNQLLKQF
MQMQKMMKKMKGGGMAKMMRSLQGRLPPGMLPPGGFPPGGGFPM
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgttcgaaaatctccaggatcgcttcgaaacggtcctgaccaatctgcgcggtcagggc
cgtctgaccgaggacaacatcaaggacaccctgcgcgaagtgcgcatggccctcctggag
gccgatgtcgcgctgccggtggtgcgccagttcatcgaggacatccgcgagcaggcgctc
ggcgaggccgtcaccaagagccttacacccggccaggtgctgatcaagatcgtcaacgac
gagctggtcaagatcatgggtgcggccaacgagcgcctggatctggccgcccagccgccg
gcggtcatcctcatggccggtctgcaaggctcgggcaagaccaccagtgtcgccaagctc
gcacgctggttgcaggagaagcagaagaaatccgtgatggtggtcagttgcgacgtctat
cgtccggcggccatcgaacagctgcgcaccgtcgccggcgaggtcggggccgagttctgt
cccagccagggcgacgaggatccggtccacatcgcccagcgcgcgctcgaaagcgcccgc
aagcgcttcaaggacgtgctgatcgtcgacaccgccggtcggctgcacgtcgacgccgag
atgatggatgagatcaagctcatccataaagcgatcaagccggtcgagaccctgttcgtg
gtcgactccatgaccggccaggacgcggccaacaccgccaaggcgttcgacgaagccctg
cccctgaccggcgtcatcctcaccaagaccgatggtgacgcgcgcggcggtgcggcgctc
tcgatccgccagatcaccggcaagccgatcaagttcctcggcaccggcgagcgcaccacg
gcgctcgaacccttccatcccgaccgcgtggcctcgcgtatcctcggcatgggcgacgtg
gtgtcgctggtcgaggaggtccaggccaaggtcgacaaggatcaggccgagaagctggtc
aagaagctcaagaagggcaaggacttcgatctggccgacttcaaggagcaactggagcag
atgaacaagatggggggcatgatgagcctgatggagaagctccccggcatgaaccagatc
ccggatcacgtcaagaacaaggccagcgacaaggaaatgggcaagctggtggccatcatc
aattcgatgacgccacacgagcgccagtttccggccgtcatcaagggatcgcgcaagcgt
cgtatcgcggccggctcgggcacccaggtgcaggacgtcaatcaactgctcaagcagttc
atgcagatgcagaagatgatgaagaagatgaagggcggcggcatggccaagatgatgcgc
tcgctccaagggcgactgccgccggggatgctgccgccgggcggattccctccgggcggc
ggctttccgatgtga

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