Allochromatium vinosum: Alvin_2572
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Entry
Alvin_2572 CDS
T01168
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
alv
Allochromatium vinosum
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alv03021
]
Alvin_2572
Transcription machinery [BR:
alv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Alvin_2572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
KORA
HTH_10
Sua5_C
YdaS_toxin
HTH_26
Motif
Other DBs
NCBI-ProteinID:
ADC63482
UniProt:
D3RP92
LinkDB
All DBs
Position
complement(2901439..2902278)
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AA seq
279 aa
AA seq
DB search
MAKDFSILPTGTIEAYINSAYQIPVLTLEEERSLAVRLRDQNDMEAAKRLVTSHLRFVIR
IARGYLGYGLPLPDLIQEGTVGLMKAVRRFEPDMGVRLVSFAVHWIRAEIHEYILRNWRI
VKVATTKAQRKLFFNLRSSKKRLGWLTKQEVDEVAADLGVKPEVVLQMESRLSNQDLSFD
GLEDDDDDSPAAPSTYLPDVRMEPSRLLEHEDTDRDQRERLYAALADLDERSKTILFERW
LSEKKQTLHELAEKFGVSAERIRQIEKNAMKKVRLQLEV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagacttctccatactgccgactggcacgattgaggcgtacatcaacagtgcc
taccagatccctgttttaacgctcgaggaagagcgttcgttggcggtgcgcctgcgcgac
cagaacgacatggaggctgccaaacgcttggtgacttcgcatctgcgcttcgtgatccgg
atcgcacgcggctatctgggttatggtctgccactgcccgatttgatccaggaaggcaca
gtcggcttgatgaaagccgtgcgccgctttgaacccgacatgggtgtgcgtttggtgtct
ttcgccgtgcattggattcgtgccgagatccacgagtacatcctacgtaactggcgcatc
gtcaaggtggccaccaccaaggctcagcgcaagctgttcttcaatctgcgcagttccaag
aagcgtctcggctggctgaccaagcaggaagtggacgaggtagccgctgatctcggtgtc
aaacccgaagtcgttcttcagatggagtcacggctgtccaaccaggatctgtcgttcgac
ggactcgaggacgatgacgacgactcgccggccgcgccctcgacctatctgcctgacgtg
cgcatggagccatcgcgactgctggaacacgaggacacggatcgcgatcaacgtgagcgc
ctctatgcggccctcgcggatctggacgaacgtagcaagacgatcctcttcgagcgctgg
ttgtcggaaaagaagcagactctgcacgaactggccgagaaattcggggtttcggccgag
cgtatccggcagatcgagaagaacgccatgaagaaagtgcgtctacagctcgaagtctga
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