Allochromatium vinosum: Alvin_2982
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Entry
Alvin_2982 CDS
T01168
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
alv
Allochromatium vinosum
Pathway
alv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Alvin_2982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alv03021
]
Alvin_2982
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_2982
Enzymes [BR:
alv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Alvin_2982
Transcription machinery [BR:
alv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Alvin_2982
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Alvin_2982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ADC63883
UniProt:
D3RRH1
LinkDB
All DBs
Position
complement(3366766..3367080)
Genome browser
AA seq
104 aa
AA seq
DB search
MARITVEDCLAHVDNRFDLVLLATKRARQLANGVEPLLAPENDKPTVLALREIAAGKITN
AMIQEAQREMDDTAAALEQALAQEFAAAATPEADDAESGKDAKD
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcacggtcgaggattgcctcgcacacgtcgacaaccgtttcgatctggtt
ctgctcgccaccaagcgcgcacgccaactggccaatggcgtcgagccgctgctggcgccg
gagaacgacaagccgacggtcctggccctgcgcgagatcgccgccggcaagatcaccaac
gccatgatccaggaagcccagcgcgaaatggacgacacggcggcggctctggaacaggcg
ctggctcaggaattcgccgccgccgccacgcccgaggccgacgatgcggaatccggaaag
gatgccaaggactga
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integrated database retrieval system
