Allochromatium vinosum: Alvin_3047
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Entry
Alvin_3047 CDS
T01168
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alv
Allochromatium vinosum
Pathway
alv03420
Nucleotide excision repair
alv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Alvin_3047
03430 Mismatch repair
Alvin_3047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_3047
Enzymes [BR:
alv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Alvin_3047
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Alvin_3047
MMR (mismatch excision repair)
Other MMR factors
Alvin_3047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADC63947
UniProt:
D3RS10
LinkDB
All DBs
Position
3429893..3432091
Genome browser
AA seq
732 aa
AA seq
DB search
MNASFLLDSLNPAQREAVSADPGHLLILAGAGSGKTRVLVHRIAWLLQVQQVQPWSILAV
TFTNKAAREMRSRLDEMLGTPVGGMWVGTFHGLAHRFLRAHWQDAGLPQQFQILDSDDQL
RLIKRLLKEMQIDEARWPPRQIQGFINRQKDEGLRPHHLSETGDFVQDRMIAVYREYEAA
RLRAGSLDFADLLLCTLELLRERADILHHYQQRFAHILVDEFQDTNAIQYAWLRLLAGGD
NHLFAVGDDDQSIYGWRGAKVENIQSFQRDYPTTRTIRLEQNYRSTGNILAAANALIAHN
PARLGKNLWTQDSAGEPIRRYTAFNEVDEARFVVERIRRFVQDGHRRDECAILYRTTAQS
RLFEEALIQAGIPYRVYGGLRFFERAEIRDALAYLRLIANPNDDASFERVVNLPTRGIGE
RTVELVREQARAAGVSLWRAARELSTSGALSPRASNALRGFLDLIESQRAAREGRALSEI
ADRVIEATGLIEHFKNSKDGKGQDRIENLEQLIETVSRFEQDLPDEDGDPLGAFLAHAAL
EAGEAEADPFEDSVQLMTLHSAKGLEFPLVFLAGLEEGLFPHSLSADDPARLEEERRLCY
VGLTRAMRQLYLTQAESRQLYGRKECPGPSRFLREIPPELIEEVRGGGITRPAFAARVPA
SRSVASSPAKSGAGAQAPEGYRLGQRVRHPKFGEGVVLNSEGRGAQARIQIDFKGGVGTK
WLVLTYARLETM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttctttcctgctcgactcactcaacccggcccaacgcgaagccgtttccgcc
gatcccggtcatctgctgatcctcgccggtgcgggatcgggcaagacacgcgtgctcgtc
caccgtatcgcctggctacttcaggtccagcaggtccagccctggtcgatcctggccgtc
accttcaccaacaaggccgcgcgcgagatgcgcagtcgactcgacgagatgctcggcaca
cccgtcggcgggatgtgggtcggtaccttccatggtctcgcccatcgctttctgcgcgcg
cactggcaggacgcgggtctgcctcagcaattccagatcctggactcggacgatcagctc
cggctcatcaagcgcctgctcaaggagatgcagatcgacgaggcccgctggccgccccgt
cagatccagggcttcatcaatcgccagaaggatgaaggactgcgcccgcatcatctgtcc
gagaccggcgacttcgtgcaggacaggatgatcgcggtctatcgcgaatacgaagctgcg
cgcctccgggccggatcgctcgacttcgctgacctcctgctctgcacgctggagctgctg
cgcgagcgggcagacatcctgcaccactaccagcagcgcttcgcccacatcctggtcgac
gaattccaggacaccaacgccatccagtacgcctggctgcgcctgctcgccggcggcgac
aatcacctgttcgccgtcggtgacgacgaccagtccatctacggctggcgcggagccaag
gtcgagaacatccagtcgtttcagcgggactacccgacgacgcgcaccatccggctggaa
cagaactatcgctccaccggcaacatcctggctgcggccaacgcgctgatcgcccacaac
cccgcgcgcttgggcaagaacctctggacccaggacagcgccggcgagccgatccgtcgc
tataccgccttcaacgaggtcgacgaggcgcgcttcgtcgtcgagcgcatccgccgcttc
gtccaggacggccatcggcgcgatgaatgcgccatcctctaccgcaccacggcccaatcg
cggctgttcgaggaagcgctgatccaggccggcatcccctatcgggtctatggcggactg
cgcttcttcgagcgcgccgagatccgcgacgcgctcgcctatctgcgtctgatcgccaat
ccgaacgacgatgcgtcgttcgaacgggtggtgaatctccccacgcgcggcatcggcgag
cgcacggtcgagctggttcgcgaacaggcacgcgcggccggcgtctcgctgtggcgcgcg
gcccgtgagctcagcaccagcggggcgctcagcccacgggcgagcaatgcactgcggggt
ttcctcgacctgatcgagagccagcgcgctgcacgcgaggggcgtgcactcagcgaaatc
gccgaccgcgtgatcgaggcgaccggactgatcgagcacttcaagaacagcaaggacggc
aagggacaggaccggatcgagaacctggagcagctcatcgagaccgtcagccggttcgag
caagatctgcccgacgaggacggtgatccgctcggcgccttcctggcccatgccgcgctg
gaagcgggtgaggccgaagccgatccgtttgaggacagcgtgcagctcatgacgctgcat
agcgccaaggggctggagtttccgctggtcttcctggccggactggaggaagggctgttc
ccacacagcctttcggccgacgatccggcgcgcctggaggaagagcgccggctgtgctat
gtcggcctgacgcgcgccatgcgtcagctctatctcacccaggccgagagtcggcagctc
tatgggcgtaaggagtgtccggggccatcgcgtttcctgcgcgagatcccgcccgaattg
atcgaggaagtccgtggcggcggtatcacccgaccggcgtttgcagccagggtgccggcc
tccaggtccgtagccagtagtccggccaagagcggcgcgggcgcccaagcgcccgaaggc
taccggctcggccagcgcgtgcgtcatcccaagttcggcgagggcgtggtgctcaacagc
gagggacgcggcgctcaggcgcgcatccagatcgacttcaagggcggcgtcgggaccaaa
tggctggtgctgacctatgcccggctggagacgatgtga
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integrated database retrieval system
