Acinetobacter lwoffii: FOB21_02405
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Entry
FOB21_02405 CDS
T06349
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
alw
Acinetobacter lwoffii
Brite
KEGG Orthology (KO) [BR:
alw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alw03016
]
FOB21_02405
Enzymes [BR:
alw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FOB21_02405
Transfer RNA biogenesis [BR:
alw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FOB21_02405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QGR73619
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All DBs
Position
complement(288847..289989)
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AA seq
380 aa
AA seq
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MFQFIQHQNDLYPVLNLMDQSSVYGLDTEFIKVDTLWPKLGVFQINVDNKVYLLDGTTLD
LTEFFNKVFNAQQNIFHACSEDIDLLYHYTQKKSLTNVFDTQVGMSFLGHGLQVSYQNAL
KQMLEVDIEKDQTRSNWLARPLSSEQLLYAANDVHYLVKLSDKIKQELDTKYLLDFALQD
CRFLTQEIGEDTPTALLYQDVGNYRHSRRQLMQLQQLMVWRDQIAKALNQPRSFILKNAS
MIDLVEKFPRNNFQLSHVKDIRSNVVREHGKTILDLLKFLPEPANWPLRLARPIRHSSKD
IGEKIDSIIQHVVNETSIPKEVLMRKKWLNALYQHVVFYKDEQDLPDYLLGWRYELLTQP
LIQVLHQDESYLSTQMKVSE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaatttattcaacatcaaaacgatttataccctgtgctgaacctgatggatcag
agttctgtttacgggctggataccgaatttatcaaggtcgatactttgtggccgaaactg
ggtgtgtttcagatcaatgtagacaacaaggtctatttgctggatggaaccaccctggat
ctgactgagttcttcaataaagtttttaacgcccagcagaatatttttcatgcttgtagc
gaagatatagatctgctttatcactatacccaaaagaaatcactgaccaatgtgtttgat
acccaggtcggtatgtcttttctggggcatggtctgcaagtcagctatcagaatgcgctc
aaacagatgctggaagtcgatatcgaaaaagaccagacccgttctaactggctggcacgt
cctttaagttcagaacaattactttatgcggccaatgatgtgcattatctggtcaagctg
tctgacaaaatcaaacaagagctggatacgaaatacctactggattttgccttgcaagac
tgtcgtttcttgactcaggaaattggcgaagataccccaactgccttgttgtatcaggat
gtcggcaattaccggcattcacgccgtcagctgatgcaattgcagcaattaatggtttgg
cgtgatcagattgccaaagcactgaatcagccacgcagtttcattttgaaaaatgccagc
atgattgatctggtggaaaaattcccgcgcaataatttccagctgagtcatgtgaaagac
attcgttcgaatgtggttcgtgagcatggcaaaaccattttagatttattgaaattcctg
ccggagccggcaaattggcctttacgtctggcacgtccaattcgccattcttccaaagat
attggcgaaaaaattgattcaattattcaacatgtggtcaatgaaacctcgattcccaaa
gaagtgctgatgcgcaagaaatggttgaatgcactgtatcagcatgtagttttttacaag
gatgaacaggatctgccggattatctgcttggctggcgctatgagttattaactcagcca
ctgattcaggtattgcatcaggatgaatcttatctgtctacccagatgaaagtcagcgag
tga
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