Acinetobacter lwoffii: FOB21_11300
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Entry
FOB21_11300 CDS
T06349
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
alw
Acinetobacter lwoffii
Pathway
alw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOB21_11300 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alw03021
]
FOB21_11300 (rpoB)
03400 DNA repair and recombination proteins [BR:
alw03400
]
FOB21_11300 (rpoB)
Enzymes [BR:
alw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOB21_11300 (rpoB)
Transcription machinery [BR:
alw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOB21_11300 (rpoB)
DNA repair and recombination proteins [BR:
alw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOB21_11300 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
QGR75153
LinkDB
All DBs
Position
2063335..2067423
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPSVMDAPYLLAIQVDSYRTFLQDGKSPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLILKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYSNENILDMFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDILDKDGKAIVEQGKRINARHVRQMEASGLEKLAVPDEYLYERIT
AEDIQLKDGDVIAANTVLSHEIMVKIAEGGVKQFNILFTNDIDRGSFVADSLRADTTSNR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSNEDITDVLKTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKCNNFGFLETPY
RKVVDGRVTDEVEYLSAIEEVGTVIAQADSAMDKDGNLTEEFVSVRHQGDFVRIPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLIADKPLVGTGMEANVAHD
SGVCVIAQRGGRIEFVDASRVVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQKVLV
NLGDEVGRGDVLADGPSTDGGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDERAQAIEKA
QLDAYRKDLKEEFKIFEEAARERVIRLLNGQESNGGGTTKRGDKLSEDVLSGLELVDLLE
IQPVDEAIAERLTQIQVFLKEKSFEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDQIDKMMKEQRTVLELRDFLDKIYNKVGGEQEDLDSLTDEEILKLSGNLRAGVP
LATPVFDGAEEGQIKELLQLAGLSSTGQTVLYDGRTGERFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgcctagc
gtcatggatgctccgtacttgctcgcgattcaagtcgactcgtacagaacattcttacaa
gatggcaaatcaccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctattgaaagttattctggcaatgctgctttagaatttgttgagtatagtcttggt
aagcctgagtttgatgtacgcgaatgtatccttcgtggctcaacttatgcagcaccaatg
cgtgtaaaaattcgtttgatcctgaaagatcgtgaaacgaagtcaattaaagacgtacgt
gaacaagaagtctatatgggcgaaatgccattgatgacggataacggtacctttgtaatt
aacggtaccgagcgtgtgatcgtgtcacaattacaccgttcaccaggcgtattctttgac
cacgataaaggcaagactcactcaagtggtaaagtcctttattcagcacgtatcattcct
taccgtggttcatggttagactttgaattcgatgccaaagacctcgtctatgtacgtatt
gaccgtcgtcgtaaattgcttgcgactgtggtactccgtgccttgggttatagcaacgaa
aacattctcgacatgttctacgagaaagtacctgtgtatcttgacatgggtagctaccag
attgacctggtgcctgaacgtttgcgtggcgaaatggcacaatttgacattctggacaag
gatggcaaggcaattgttgagcaaggtaaacgtatcaatgcgcgtcatgtacgtcaaatg
gaagcttcaggtcttgaaaaacttgcagtgccagatgagtacctatatgagcgtatcact
gctgaagacatccagttaaaagatggcgatgtgattgcagccaatactgtattaagccat
gaaatcatggtgaaaattgcagaaggcggcgtgaagcagttcaatattctgttcaccaat
gatatcgaccgcggttcatttgttgcagattctctacgtgcagatacaacgagcaatcgt
gaagaagcattggtagaaatctacaaagtgatgcgtccgggcgaaccaccaaccaaagaa
gctgctgaaaacttattcaacaacttgttcttctcttctgaacgttatgacttgtctcca
gttggtcgtatgaagttcaaccgtcgtttgggtcgtccttatgaagtgggtacagaccag
aagtcacgtgaggttgaaggcattctctcgaacgaagatatcactgatgtattaaaaaca
ttagttgaaatccgtaacggtaaaggtgaagtcgacgatatcgatcacttgggtaaccgt
cgtgttcgttctgtgggtgaaatgacagaaaaccaattccgtgtaggtctggttcgtgta
gaacgtgctgttaaagaacgtctatctcaagctgaaactgacaacctgtctccgcaagat
ttgatcaatgcgaaacctgttgctgctgcaatcaaagaattctttggttcaagccagttg
tctcagtttatggatcaaaacaacccgttatctgagattacgcacaaacgtcgtgtttct
gcgcttggtcctggcggtttgacgcgtgaacgtgcaggctttgaagtacgtgacgtacat
caaactcactacggtcgtgtatgtccaattgaaacgcctgaaggtccaaacattggtttg
atcaactcgctttctgtttatgcgaaatgtaacaactttggttttctggaaaccccatac
cgtaaggttgttgatggtcgtgtaacagatgaagttgaatacctgtctgcgattgaagaa
gtaggtactgtcattgcacaggccgattctgcaatggataaagacggtaacttaacagaa
gagtttgtatctgttcgtcatcagggtgacttcgtacgtattcctcctgaaaaagtaacg
catatggatgtatctgctcagcaggtcgtatctgtagcagcgtcactgattccattccta
gaacacgatgacgccaaccgtgcgttaatgggttcgaacatgcaacgtcaggcagttccg
acgttgatcgctgacaagccgcttgttggtaccggtatggaagcgaacgtagcacatgac
tcaggtgtatgtgtgatcgctcagcgtggtggtcgtatcgagtttgttgatgcgtctcgt
gtggttattcgtgtgaatgaagacgaaatgatcgcaggtgaagcaggtgtagatatctac
aacctgatcaagtacacccgttcgaaccagaacacttgtatcaaccagaaagttcttgtg
aacctaggtgatgaagtaggtcgtggtgatgtcctggctgatggtccatcgactgatggc
ggtgagctggcactgggtcaaaacatgcgcgttgcgttcatgacctggaatggttacaac
tacgaagactcgatcttactttctgagcgtgttcttcaagaagaccgtttaacgtctatt
catatccaggaattatcatgtgtcgcacgtgataccaaactgggtgcggaagaaatcact
gctgatattccgaacgtaggtgaagctgctctgtctaaactggacgagtcaggtatcgtt
tacatcggtgctgaagtaactgctggcgatatcctggttggtaaagtaacccctaaaggt
gaaacacaacttactccggaagaaaaattgctacgtgcaatcttcggtgaaaaagcagct
gacgtaaaagactcatctttacgcgttccatcaggtactaaaggtacagtcattgacgtt
caagtgtttacacgtgacggtcttgaaaaagacgaacgtgctcaagcaattgaaaaagcg
caattggatgcataccgtaaagacttgaaagaagaattcaaaatcttcgaagaagctgca
cgtgaacgtgtaatccgtctactgaatggccaagagtcgaatggtggcggtacaactaaa
cgtggcgacaaactgtctgaagacgtgttgtctggtttagagcttgttgatcttcttgaa
attcaaccagttgatgaagcaattgctgaacgtttaactcaaattcaagtgttcttgaaa
gagaagagcttcgaaattgacgagaaatttgctgagaaaaaacgcaaactttctacaggc
gatgaactgaccactggcgttttaaaagttgttaaggtttatcttgctgtaaaacgtcgc
atccaaccgggtgataagatggcgggtcgtcacggtaacaaaggtgttgtatcaaacatc
ttgccggtagaagacatgccacatgatgccaacggtgtacctgttgatatcgtattgaac
ccgcttggcgtaccatcacgtatgaacgtgggtcagattcttgaaactcacttgggtatg
gcggcgaaaggtcttggcgatcaaatcgacaagatgatgaaagagcaacgtactgtactt
gagcttcgtgatttcctggacaagatttacaataaagttggtggcgagcaagaagatctt
gatagcttgactgatgaagaaatcttgaaactttctggcaacttgcgtgctggtgtgcct
ttggctactcctgtattcgatggtgctgaagaaggtcagatcaaagagttgttacaactt
gcaggcctatctagtactggtcagaccgtattatatgatggtcgtactggtgaacgtttc
gatcgtccggtaactgttggttatatgtacatgctgaaactgaaccatttggttgatgac
aagatgcatgcgcgttcaactggctcttattctctggtaacgcaacagccgctgggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtctgggcactagaagcttac
ggtgcagcatatacgctacaagaaatgctgactgtgaaatcggatgacgttgaaggccgt
acccgtatctacaagaacattgtggatggcaaccattatatggacccgggcatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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