Acinetobacter lwoffii: FOB21_11945
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Entry
FOB21_11945 CDS
T06349
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alw
Acinetobacter lwoffii
Brite
KEGG Orthology (KO) [BR:
alw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alw03032
]
FOB21_11945 (topA)
03400 DNA repair and recombination proteins [BR:
alw03400
]
FOB21_11945 (topA)
Enzymes [BR:
alw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FOB21_11945 (topA)
DNA replication proteins [BR:
alw03032
]
Prokaryotic type
DNA Topoisomerases
FOB21_11945 (topA)
DNA repair and recombination proteins [BR:
alw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FOB21_11945 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_4
Zn_ribbon_recom
Toprim_C_rpt
DUF7351
CEP104_ZnF
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QGR75276
LinkDB
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Position
2214422..2217064
Genome browser
AA seq
880 aa
AA seq
DB search
MANAPRSTSKSSTAKSPDAGSKRALVIVESPAKAKTINKYLGPNYIVKSSVGHVRDLPTG
GSAKSTEKKPATRTKLTDAEKAEKSQNALINRMGVDPEHDWKAKYEVLPGKEHVVAELKK
LASQVDEVYLATDMDREGEAIAWHLKEVIGGDDSRYQRVVFNEITKNAIQDAFKHPSRLD
TNKVNAQQARRFLDRVVGFMISPLLWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPEE
YWQVFADTKSKKDDIRLEAVKQNGKTLKLRNKDETDALLNLIKDADYTVSAREDKPTKVN
PSAPYITSTLQQAASTRLGFSVKKTMMLAQRLYEAGFITYMRTDSTFLSDDAVSMVRGHI
ESEFGEKYLPAKPNRYGNKAGAQEAHEAIRPSMVGLKGDSLVGVERDAQRLYDLIWRQFV
ACQMTPAEYLSSTILVDANGVELKAKGRTLVFDGFTRVRGANKADDDILLPAVKVGEVLK
LEKLDPSQHFTKPPARFTEASLVKELEKKGIGRPSTYAAIISTIQDRGYVKLDNRRLYAE
KMGEIVTDRLDENFSNLMNYAFTADLEGQLDKVADGERNWKELLDSFYGDFKQRLTTAQG
ENGMRRNQPVEVDAVHCKECDRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLTPVESL
AALSDDEAAETADLMSKKRCPICETAMDSYVIDGGRKLHICGNNPDCSGFELEEGEFKIK
GYDGPSIPCDKCDGEMQLKTGRFGPYFACTSCDNTRKVLKSGQPAPPRVDPIKMEHLRSA
KHDDFFVLRDGAAGLFLAASKFPKVRETRAPKVAEIRSVADQLDPKYQFILQAPDVDPEG
NPTLVKFSRKNQSQYIGSETAEGKQTKWSLVYQDGKWVEA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgctcctcggtccacatcaaaaagcagcacagcgaagtctcccgacgctgga
agcaagcgtgccctagtgattgtggagtcgcctgcaaaagcgaaaacaatcaataagtac
cttggtccgaactacatcgtaaaatcatcagtgggtcatgtgcgtgacttgccgactggc
ggttctgcaaaatcgacagagaaaaaaccggcgacacgtaccaaactgacggatgcagaa
aaagctgaaaaatcacagaatgcgttaattaaccgcatgggtgtcgatccggaacatgac
tggaaagccaaatacgaagtccttcctggcaaagaacatgtagttgccgaactgaaaaaa
ctggcatcgcaagtcgatgaagtctatctggcaacggatatggacagggaaggggaagcg
attgcctggcatttaaaagaagtcatcggcggtgatgattcgcgttatcagcgtgtggtc
ttcaacgaaattaccaaaaacgcgattcaggatgcctttaagcatccgtcacgtctggat
accaataaagtcaatgcgcagcaggcacgccgtttcctggatcgtgtcgtgggttttatg
atttcgccattgctttgggaaaagattgcccgtggcctgtcagccggtcgtgtacagtcg
gttgcggtgaaactggtggttgaacgcgaacgtgaaattcgggcctttattcctgaagaa
tactggcaggtgtttgccgataccaaatcgaaaaaagatgacatccgtctggaagcagtc
aagcaaaatggcaagactttaaagcttcgtaataaagacgaaacggatgcactgttaaac
ctgattaaagatgcggattataccgtttctgcccgtgaagataagccaaccaaagtcaat
ccaagcgcgccctatatcacgtcaacgttgcaacaggcggccagtacccgtctcggtttt
tctgtgaagaaaaccatgatgctggcacagcgcctgtatgaagccggtttcattacctat
atgcgtaccgactcgaccttcctgagtgatgatgcggtaagcatggtccgtggccatatc
gaatcagaatttggtgagaagtacctgccggccaaaccaaaccgctatggcaataaagcc
ggtgcgcaagaagcgcatgaggcgattcgtccatctatggttggcttaaaaggcgacagt
ctggtgggtgttgagcgtgatgcacagcgcctctatgacttgatctggcgccagtttgtt
gcctgtcagatgactccggcagaatacctgtcttctaccattttagtggatgctaatggc
gtggaactgaaagccaaaggccgtaccttggtctttgatggctttactcgcgtgcgtggt
gccaataaagccgatgacgatattttattgcctgcggtcaaagtcggtgaagtcctcaaa
cttgagaaacttgatccatctcaacatttcaccaagccaccggcacgttttaccgaagcc
tcactggtcaaagaactcgagaaaaaaggcattggccgtccatcaacctatgctgcgatt
atctcgaccattcaggatcgtggttatgtgaaactggataaccgtcgtctctatgccgag
aagatgggtgagatcgttaccgatcgtctggatgaaaattttagtaatctgatgaactat
gcctttaccgcagatcttgaaggtcagctggataaagtagcagatggtgagcgtaactgg
aaagagttattagacagcttctatggcgattttaagcaacgtttgactacggcgcagggt
gagaacggtatgcgccgcaatcagcctgtagaagtggatgcagtacactgtaaagaatgt
gaccgtccaatgcagattcgtaccggaaccacaggcgtattcttgggttgttcaggctat
aacctaccgccgaaagagcgttgtaaaggaaccttgaacctgacaccagttgagtctctg
gctgcattatctgatgatgaggctgcggaaactgctgacctgatgtcgaagaagcgttgt
ccgatctgtgaaactgccatggacagctatgtgattgatggcggccgtaaactgcatatc
tgtgggaataacccggactgtagtggttttgaacttgaagaaggtgagttcaaaattaaa
ggctatgatggcccgagtatcccatgcgacaagtgtgatggtgaaatgcagctgaagacg
ggtcgttttggtccgtattttgcctgtaccagctgtgacaatacccgtaaagtcttaaag
agcggtcagcctgcgcctccacgtgtggatccgatcaagatggagcatttacgttctgcc
aagcatgacgatttctttgtactgcgtgacggtgcagccggtttattcctggcggcaagc
aagttcccgaaagtgcgtgaaacccgtgcaccgaaagtggccgagattcgttctgttgcc
gaccagcttgatccaaagtatcagtttatcttgcaggcacctgatgtggacccggaaggg
aatccaactctggtaaaatttagccgtaagaaccagtcacaatatattggttcggaaact
gcagaaggcaagcaaaccaaatggtctctggtttatcaggacggaaaatgggttgaagcc
taa
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