KEGG   Acinetobacter lwoffii: FOB21_12745
Entry
FOB21_12745       CDS       T06349                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
alw  Acinetobacter lwoffii
Pathway
alw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:alw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FOB21_12745 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alw03021]
    FOB21_12745 (rho)
   03019 Messenger RNA biogenesis [BR:alw03019]
    FOB21_12745 (rho)
Transcription machinery [BR:alw03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     FOB21_12745 (rho)
Messenger RNA biogenesis [BR:alw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     FOB21_12745 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 AAA_25 NACHT S1CSD-TOTE-2 OB_RNB ATPase_2 AAA GpA_ATPase
Other DBs
NCBI-ProteinID: QGR75432
LinkDB
Position
complement(2384988..2386256)
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTTRVIDLVAPIGKGQRSIIVAPP
KAGKTMLLQSIAQSIVRNNPEVILIVLLIDERPEEVTEMERTVRGEVVASTFDESPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDEVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMSEDNLRKVWILRKLLHTQDELAAMEFLLDRMKETKTNDDFFDQMKRKA
SN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaatttaaccgaactcaagaaaaaaccgattggcgaactcatcaagattgccgagttt
atgggcctcgaaggtatggctcgtaaccgtaagcaagacattatttttgccatcttaaaa
cgtcatgcaatgaatggcgaagagatttttggtgatggcgttctagaaattttgtcagat
ggttttggctttttacgctcagccgcaggttcttatttagcaggtcctgatgatatctat
gtcagcccttctcaaattcgtcgttttaacctccgtactggcgacaccattactggcacc
attcgtccgccgaaagaaggtgaacgttattttgctttacttaaagtcaatcaaattaac
tacgacacacctgaaaattcacgtaacaagattctgtttgaaaacttgacgccattattc
ccgaccgaacagttggtgatggagttgggcaatggcaccactgaagatttaaccacccgt
gtgatcgacttagttgccccgattggtaaaggccagcgttcaattattgtggctccgccg
aaagcgggtaaaaccatgctgctgcaaagcattgcacagtccatcgttcgcaataatcct
gaagttattctgatcgttctcctaattgatgagcgtccagaagaagtgactgagatggag
cgtacggttcgtggtgaagtcgtggcttctacctttgatgaatctcctgcacgtcacgtt
caagtcgctgaaatggtgattgaaaaagcaaaacgtctggttgaacataagaaagatgtg
gtgattttgcttgactcgattacccgtctggcacgtgcttataacactgtgattccttca
tcaggcaaagtactgactggtggtgtggatgcacatgccttagaacgccctaaacgtttc
ttcggtgctgcacgtaatatcgaagaaggcggttcactgaccatcatttctactgccctg
attgaaaccggtagtaaaatggatgaagtgatttacgaagaattcaaaggtacaggtaac
caggaaattacccttgatcgtcgtattgctgaaaaacgcgtattccctgcgatgaacatc
aagaaatctggtactcgccgtgaagaacgcctgatgtcggaagacaatctacgcaaagtc
tggattctgcgtaagctgctgcatactcaagacgaattggcggcaatggaattcttactg
gatcgtatgaaagaaaccaagaccaatgatgatttctttgatcagatgaaacgcaaagct
tcaaattaa

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