Acinetobacter lwoffii: FOB21_16435
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Entry
FOB21_16435 CDS
T06349
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alw
Acinetobacter lwoffii
Pathway
alw03030
DNA replication
alw03430
Mismatch repair
alw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOB21_16435 (dnaE)
03430 Mismatch repair
FOB21_16435 (dnaE)
03440 Homologous recombination
FOB21_16435 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alw03032
]
FOB21_16435 (dnaE)
03400 DNA repair and recombination proteins [BR:
alw03400
]
FOB21_16435 (dnaE)
Enzymes [BR:
alw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOB21_16435 (dnaE)
DNA replication proteins [BR:
alw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOB21_16435 (dnaE)
DNA repair and recombination proteins [BR:
alw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOB21_16435 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
DUF4447
Motif
Other DBs
NCBI-ProteinID:
QGR76082
LinkDB
All DBs
Position
complement(3135294..3138866)
Genome browser
AA seq
1190 aa
AA seq
DB search
MHFVHLGIHTEFSITESIVRIPDLVKAAEEEQMPALALTDLSNLHAAVKFYGKCLSKGIK
PILGSEIRLNDAEHRMTLLAMTNTGWRNLTELVSEGFISGQQLDIPCVQKQWILNQPEDM
IALLGMHSDVGKMLMSSNPQKAEPLLEEWVEKFGNRVYLALTRTNRPDEDNFILEAVKLA
KKYNIGVVAHNDVHFMTRDDYEAHEARVCIADGYVLGDNRRPKTYSPEQYFKSAEEMTAL
FSDIPSAIENTYHIAKRCNVTLQLGKYFLPDYPIPEGHTIDTFFAHLSKEGLEERLNFLY
PPEQRDEDWPEIRKPYDERIEYEINIINSMGFPGYFLIVMDFIQWSKSNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYELLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLSLLESLEAEPQLKDI
VTNPSNPDHDDAAEIWEMALKLEGITRNTGKHAGGVVISPTKITDFSAVMCDADGTGRVA
QFDKDDVESAGLVKFDFLGLRNLTVIEDAVKNINKRIKADKPLDIAYIPLEDKDAYLVFA
NANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGDFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQYCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIE
GASKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFLSAVLTS
EMQNTDNVVFLIDDCRKNNLEVLPPSVNMSLYQFHAIDEQTIVYGLGAIKGVGEAAMQSV
IDSRAQEGPFRDLFDFCHRIDLKKINKRTLEALIRSGALDCLGIDRADLMAQLPEAVQAA
EQARSNRETGIMDLFGEVEEVQRKPSKPVKPWADEVRLKGEKDTLGLYLTGHPIDVYRNE
LKAFVPCQINELTPTRRGVTTVFAGLVVDIANFPNRMMMTLDDGTARIEISANHERFNRF
KEIIQLDKVVVIEGEIYEREGFDRPMGRLTKAFSLNEIRQKRANSIKITLTAEHFSKSLS
RDLQQILTPYCNVDMSAHIPVILYLDYPYATTELHLGLNWKVAPLDELLAKLRDYFGKEA
LHIEYQVKSKAAKAVSYEQAKPVDIPPPPADMSMDDALELYQAESQPQYS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgttcatcttggtattcatacagaattttcgattactgaatccatcgtacgg
atacctgacttggtcaaagctgccgaagaagaacagatgcctgcccttgcgctcacggat
ctttctaacctgcatgctgccgtcaagttctatggcaaatgtctgagcaaaggcatcaag
ccgattctgggttctgaaattcgcctgaatgatgccgaacatcgcatgaccttattggcc
atgaccaataccggctggcgcaacctgactgaactggtatctgaaggctttatcagtggc
cagcaattggatattccctgcgttcaaaaacaatggattttaaatcagcctgaggacatg
attgccctgctcggcatgcattccgatgtcggcaaaatgctgatgagttcaaatccgcaa
aaagcggaaccgctgctagaagaatgggtcgaaaaatttggtaatcgtgtttatcttgcc
ctgacccgtaccaatcgtccggatgaagacaacttcattctggaagccgtgaagctggca
aaaaaatacaatatcggtgtggttgcacataatgatgtgcacttcatgacccgtgacgat
tatgaagcgcatgaagcacgggtatgtattgcagatggttatgtgcttggtgacaaccgc
cgccctaaaacctattcacctgaacaatatttcaaatctgctgaagaaatgacagcgctg
ttctcggatattccatctgcgattgagaacacctatcacattgccaaacgctgtaatgtg
acgctgcaactgggcaaatacttcctgcctgattatccgattcctgaaggtcataccatt
gataccttctttgcacacttgtccaaagaaggtctggaagaacgcctgaatttcctgtat
ccgcctgaacaacgtgatgaagactggccagaaatccgcaagccttatgatgagcgtatc
gaatacgagattaacatcattaactcgatgggattcccgggctacttcctgatcgtgatg
gacttcattcagtggtcgaaaagtaacggcgttccggtcggtccgggccgtggttcgggt
gcaggttcactggtcgcctatagcttaaaaattaccgatcttgacccgctgcgttatgaa
ctgctgttcgaacgtttcctgaacccggaacgtgtttcgatgcccgacttcgacgtcgat
ttctgtatcgcaggccgtgaccgcgtgattgactatgtagcacgtacctatggccgtgat
gcggtctcccagattgcaacattcggcactatggcggccaaaggtgcgattcgtgatgtt
gcccgcgttttgggtaaatcttatggcttggcggatcgtatctcgaaaatgattccgacc
aagcctttaggtctaagcctgcttgagtcactagaagctgaaccccagcttaaagatatc
gtcaccaatccatccaatccagaccatgacgatgcagccgaaatctgggaaatggcactg
aaactggaaggtattacccgaaacaccggtaaacacgccggtggtgtggtgatctcgcca
accaaaattaccgatttctctgcggtcatgtgtgatgccgatggtaccggacgcgtggca
cagttcgataaagacgatgtcgaatctgcaggtctggtgaagtttgacttcttgggtttg
cgtaacctgacggtgattgaagatgcggttaaaaatatcaataaacgcatcaaagcggat
aaacctttagatattgcttatatcccgcttgaagataaagacgcatatctggtctttgcc
aatgccaacaccaccgcggtattccagtttgaatccgtgggcatgaagaagatgctgaaa
gaggcacgcccgagcaagtttgaagaaattattgccttcgtatcgctgtaccgtccaggc
ccgatggatctgattcctgactttatccaccggatgcatggtggcgattttgaatatctg
catccattgcttgaaggcgtgctagaacccacctacgggattatggtgtatcaggaacag
gtaatgcaggctgcacagtactgtgccggctatacccttggtggcgcggacttgttacgt
cgtgccatgggtaagaaaaaaccggaagaaatggtcaaacagcgccagatctttattgaa
ggtgcatcgaaaaaagacattgatgaagccacggccaaccatatcttcgactatatggaa
aagttcgccggctatggttttaacaaatcgcatgctgctgcctatgctttggttgcctac
cagaccgcatggctgaaagcacattatccggcggaattcctgtctgcggtattgacctcg
gagatgcagaacaccgataacgtggtattcctgattgatgactgtcgcaagaataatctg
gaagttttaccaccgtcagtgaatatgtcgctgtatcaattccatgctatcgatgagcaa
accattgtctatggtctaggtgcgatcaaaggcgtcggtgaagcggcgatgcagtcggtg
attgactcgcgtgcgcaagaaggtccattccgtgacttgtttgatttctgtcaccgtatt
gatctgaaaaaaatcaataagcgtactctggaagcactgattcgttcaggcgcactggat
tgcttaggcattgaccgcgccgacctgatggcgcaactgcctgaagcggttcaagctgcg
gaacaggcacgttccaatcgtgaaaccggcatcatggacctgtttggcgaagttgaagaa
gttcagcgcaagccatctaaaccggtcaagccatgggcggatgaagttcgcctgaaaggt
gaaaaagacacgcttggcttgtatctgactggccacccgattgatgtgtatcgcaatgag
ctgaaagcctttgtgccttgtcagatcaatgagctgacgccgacccgccgtggcgtgacc
accgtgtttgcaggactggtggtggatattgccaatttcccgaaccggatgatgatgaca
ctggatgatggtacggcacggattgaaatttcagccaatcacgaacgcttcaaccgcttt
aaagagattatccagctcgataaagtggtggtgattgaaggcgaaatctatgagcgtgaa
ggctttgaccgtccgatgggacgcctcaccaaagcattcagcctgaatgaaattcgccag
aaacgtgccaatagcatcaagatcactctcacagccgagcatttcagcaagagcttgagc
cgtgacttgcagcagattctgactccttattgcaatgttgatatgtccgcacatattccg
gtgattctatatctggattacccgtatgccacgactgaactgcatctgggtctcaactgg
aaagtcgccccactggatgagctcctagccaaattgcgtgattattttggtaaagaagcc
ttgcatattgagtatcaggtcaagtccaaagctgccaaagccgtgtcctatgaacaggcc
aagccggtggatattcctccgccgcctgcggacatgagcatggatgatgcactggagctg
tatcaggctgaatcccagccgcaatattcataa
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