Allobranchiibius sp. GilTou73: LVQ62_01280
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Entry
LVQ62_01280 CDS
T07800
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
alx
Allobranchiibius sp. GilTou73
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alx03400
]
LVQ62_01280
Enzymes [BR:
alx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVQ62_01280
DNA repair and recombination proteins [BR:
alx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LVQ62_01280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
RecC_C
DUF4312
Motif
Other DBs
NCBI-ProteinID:
UIJ35075
LinkDB
All DBs
Position
complement(258738..261485)
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AA seq
915 aa
AA seq
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MAGHPATTRALLNARRALRDVDATTLDEIAEANALTADVVRLHRGAVERLGANWYDEADL
LLEACSQPLPETGSVVFYLPQDLTRAENAFAERLVAESDAHVILGATGDTRPDRGPTAAA
SFLSGELPADAVAPAQPRATRVLHASDADDEVRAVVREVVASLSTTAAHRVGILYSRRVP
YARLLNEQLVSAGVRFNGPGARPVEERAVPRLLLGLMRARAGGYRRGDVMGALGEAPARD
LTGGRISVSRWERISRGIGIVDDTDWDERLDAFVAERRAASADVAESDLAWRERDAQDAE
HLRDTVRAVRETFDKVDCSTSWADAAVLLTGLLDRMVPDGESNRLPLEEQYAAVATRRAL
AGVADLDLTDLSPSMVLVEEIVQQQLEAGSERVGRFGDGVFVGPVADAIGLDLDVVFVVG
LSEDQCPGRVMEDPLLPERVRVRTGGQLPGIRETIERQHRHVLAAFQCAPTVVATFPRGD
LRRQTNRIPSRWLLPTLRQLSGDPTLTATAFATAGGIESIPSFAAGLLSTSHPATEQEWR
TRAVAAHTPFDDPTMTAARELQQGRSGETPTRFDGLVGTTPALPAVTGANAIVSPTALES
FAACPHAYFVQRILGVRPVEEPEDVFEVSPAEVGTFIHHCFDSLITEAAREHTLPGYGEP
WTAQQRARLQVVAGEEGQRLVASGRAGHPIMWERRLVEIRRQLDDMLTDDERWRVEQGAR
IVGSEVRFGFDDAPAVELLLGDGSVARMRGSADLVMETETGTLIVVDIKTGSPTKFKDIS
TTNPVVGGTKLQLPAYAHAVRAQYGDASSKVEALYWFHSPRARKRIELELTDDVRVQYVN
AVERLTTAISSGIFPPRAPEKDDYLWVQCPNCNPDGLGHSDVRERWETIKTAPQLRELVT
LIEPGAVVSGGSQHD
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
gtggcagggcatcccgccactacgcgtgccctgcttaacgcacgacgcgcgctgcgcgac
gtcgatgcaaccacccttgatgagatcgccgaggccaatgccctcaccgccgacgtcgtg
cgcctgcaccgaggcgccgtcgagcggctcggcgcaaattggtacgacgaggccgacttg
ctgcttgaggcgtgctcccagccgttgcccgagaccggttcggtcgtcttctatctgccc
caagacctgactcgggccgagaacgcgttcgccgagcggctcgttgccgagagtgacgcg
cacgtaatcctgggcgccacgggcgacacccgaccggatcgcgggccgactgcggcagcg
agtttcctcagtggcgagctacctgcggatgcagtcgcgcccgcgcagccgagggcgacc
agggtgctgcacgcctcggacgcggacgacgaggtgcgcgccgtcgtacgtgaggtcgtt
gcgtccctctcgacaacggccgcccaccgcgtcgggattctctactcgcggcgcgttccg
tacgcacgcctcctgaacgagcaacttgtctctgccggcgtcaggttcaacggaccgggg
gctcggcccgtcgaagagcgcgccgtgcctcgccttcttctgggtctcatgcgggcacgt
gccggaggctaccgacgaggtgacgtcatgggcgcactcggtgaggcgcctgcccgggat
ctgacgggcgggcggatcagcgtctcccgatgggagcgcatctcgcggggcatcgggatc
gtggacgacacagattgggacgagcggctcgatgccttcgtcgctgagcggcgtgcagcg
tcggccgacgtcgccgagagcgatctcgcctggcgcgagcgagacgcccaggatgccgag
cacctgcgcgacacggtccgcgccgtcagagagacgttcgacaaggtggattgctcgacg
tcgtgggcagacgccgccgttctcctgacgggtctattggaccggatggtgccggacgga
gagtccaaccggctcccgcttgaggagcagtacgccgcggtcgcgactcgccgcgccctg
gcgggtgtcgccgacctcgacctcaccgacctgtcgccatcgatggtcctcgttgaggag
atcgtccagcagcagctggaagccgggagcgagcgggtcggacggttcggcgatggagtc
ttcgtcgggcctgtggccgatgccatcgggctcgacctggatgtggtgttcgtggtcggt
ctctccgaggaccagtgccccgggcgggtgatggaggacccgttgctgccggaacgcgtt
cgcgtgcggacaggcggccagctgcccggcatccgggagacgattgagcgacagcaccgc
catgtccttgcggccttccagtgcgcgcccaccgtcgtggccacctttccccgcggcgat
cttcgccggcagactaatcgcatcccgagccgctggctccttcccacgttgcggcagctg
tcaggggatccgacgctcacggcgacggcgttcgcgaccgccggcggaatcgagtcgatc
ccctcgttcgcggcgggccttctgtcgacgtctcatcctgcgaccgagcaggaatggcgc
acccgagccgtcgccgctcacacgccgttcgacgacccgaccatgacggccgcgcgagag
ctccagcagggccgatccggtgagacgccgaccaggttcgacgggctggtgggtacgacg
ccggcattgcccgccgtcaccggtgcgaatgcgatcgtctccccgaccgctctggagtcg
ttcgcagcctgtccgcacgcgtatttcgtccagcggatcctcggggtgcgtcccgtcgaa
gagccggaggatgttttcgaggtgtcccccgccgaggtcggcacgttcatccaccactgt
ttcgattcgctgatcacggaggcggcccgagagcacacccttcctgggtacggcgagccg
tggactgctcagcagcgcgcacgtctgcaggtagttgccggggaggaaggacagcggctg
gtcgcaagcgggcgcgccggccacccgatcatgtgggaacggcggctcgtcgagatcagg
cggcagctcgatgacatgttgaccgacgacgagcgctggcgggtcgagcagggcgcccgc
atcgtcggtagcgaggtgaggttcgggttcgatgacgcacctgcggtggagctccttctc
ggtgacggcagcgtcgcacgcatgcgtggttctgccgacctggtcatggagaccgagacc
gggacactgatcgtcgtggacatcaagacgggcagtccgacgaaattcaaggacatcagc
acgacaaatcccgtggtgggcgggaccaagttgcagctacctgcgtacgcgcacgccgtg
cgggcgcagtacggcgacgcgagcagcaaggtcgaggccctgtactggttccacagcccg
cgagctaggaaacgcatcgaactagagctcaccgatgacgtccgagtgcagtacgtcaat
gcggtcgaacgcctcaccaccgccatcagcagcggtattttcccgccgcgagcgcccgaa
aaggatgactatctctgggtgcagtgtcccaattgcaacccggacggcctcgggcacagt
gacgtacgagaacgctgggagaccatcaagacagcacctcagttacgcgagctggtgaca
ttgatcgagcccggagcggtcgtctctggggggagtcaacatgactga
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