Allobranchiibius sp. GilTou73: LVQ62_01380
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Entry
LVQ62_01380 CDS
T07800
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alx
Allobranchiibius sp. GilTou73
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alx03032
]
LVQ62_01380 (topA)
03400 DNA repair and recombination proteins [BR:
alx03400
]
LVQ62_01380 (topA)
Enzymes [BR:
alx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVQ62_01380 (topA)
DNA replication proteins [BR:
alx03032
]
Prokaryotic type
DNA Topoisomerases
LVQ62_01380 (topA)
DNA repair and recombination proteins [BR:
alx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVQ62_01380 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UIJ35091
LinkDB
All DBs
Position
complement(285396..288182)
Genome browser
AA seq
928 aa
AA seq
DB search
MPRKLVIVESPAKAKKIGGYLGSDYVVDASVGHIRDLPTPSEMPTDMKKGPYGKFAVDVD
NGFDAYYVVDPDKRKKVAELKRLLKDSDELLLATDEDREGEAIAWHLLEVLKPKVPVRRM
VFHEITKEAIVRAAQDTRELDTDLVDAQETRRILDRLYGYEVSPVLWRKIRQGLSAGRVQ
SVATRLVVQRERERMAFRSASYWDVEGDFAPQEAGQSFAARLSSVDGVRVATGRDFADSG
ELRASNVVHLNQSRATSIANAVAAATATVSSVQEKPYTRRPSAPFTTSTLQQEASRKLRL
SSKNAMRVAQRLYENGYITYMRTDSTTLSESAMTAARAQASDMYGAEYITDTPRRYEKKA
KGAQEAHEAIRPAGDRFRTPAQVAGELRGEDFSLYELIWKRTVASQMTDARGSTATVRLS
VPVASSGVAEQVEFSASGTVITFRGFLAAYEEGRDAGDATDASEQERRLPQLTEGALLDV
ERAEADGHETSPPARYTEASLVKAMEERGIGRPSTYAATVGTIQDRGYVRTKGTALVPTW
LAFAVTRLLEEHFPSLVDYDFTASMEEGLDLIASGDRGRVEWLNKFYFGATGQTVEGLRE
MVEHLGEIDAREISTIDLGDGMVVRVGRYGPYVEQVVPVGVDPATGEVTGEAPDPDAKPR
RATIGDDVAPDEMSPEKARELLATADDDGRVLGKDPESGHEIIARAGRYGPYVTEVLPEE
PEADKPAKGKKKAAKAKPRTASLFKEMDLATIELDAALKLLSLPRVVGTVTEGEGDEATQ
VEITAQNGRYGPYLKKGTDSRSLVTEQQLFDITLEEAVAIYAEPKRRGRAATPPLKELGE
DPVSGKPVVVKDGRFGPYVTDGESNATLRKDDDPESITPERGFELLAEKRAKGPTTRKRT
VKKTAKKSTAKKSAAKKTTAKKTAAKSS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtgccacgcaagctcgtcatcgtcgagtcccccgccaaagccaagaagatcggcggatat
ctcggctccgactacgtcgtcgacgccagcgtcggccacatccgcgacctgccgaccccg
tcggagatgcccacggacatgaagaagggcccgtacggcaagttcgccgtcgacgtggac
aacggtttcgacgcgtactacgtggtcgatccggacaagcgcaagaaggtcgccgagctc
aagcggctgctgaaggactccgacgagctgctgctcgcgaccgatgaggaccgcgagggc
gaggccatcgcgtggcacctgctggaggtcctcaagcccaaggtgccggtgcgccggatg
gtcttccacgagatcaccaaggaagcgatcgtccgcgccgcgcaggacacccgcgagctg
gacaccgacctggtcgacgcgcaggagacccgccgcatcctcgaccgcctctacggctac
gaggtcagccccgtgctgtggcgcaagatccgccagggcctgtccgccgggcgtgtgcag
tccgtcgcgacccgcctggtcgtgcagcgcgaacgcgagcggatggcgttccgctccgcg
tcgtactgggacgtcgagggtgacttcgccccgcaggaggccggtcagtcgttcgcggcg
cggctgagctcggtggacggcgtacgcgtcgccaccggccgcgacttcgccgacagcggc
gagctgcgcgccagcaacgtcgtgcacctgaaccagtcccgcgcgacctccatcgcgaac
gccgtcgccgcggcgaccgccacggtcagctcggtgcaggagaagccgtacacccgcagg
ccgtcggcgccgttcaccacctcgacgctgcagcaggaggccagccgcaagctgcgcctg
tcgagcaagaacgcgatgcgcgtcgcgcagcggctgtacgagaacggctacatcacctac
atgcgcaccgactccacgacgttgtcggagtcggccatgacggcggcgcgggcgcaggcc
agcgacatgtacggcgcggagtacatcaccgacaccccgcgtcgttacgagaagaaggcc
aagggtgcccaggaggcgcacgaggcgatccgcccggccggagaccgcttccgtacgccg
gcgcaggtcgccggtgagctgcgcggcgaagacttctccctctacgaactgatctggaag
cgcaccgtggcctcgcagatgaccgacgcccgcggctcgactgcgactgtgcgcctcagc
gtgccggtggccagcagcggcgtggccgagcaggtcgagttcagcgccagcggcaccgtc
atcaccttccgcggtttcctcgcggcgtacgaggagggtcgcgacgccggcgacgcgacg
gacgcctccgagcaggagcgccgcctgccgcagctgaccgagggcgcgctgctcgacgtc
gagcgcgccgaggccgacggccacgagacgagcccgcccgcccgctacaccgaggccagc
ctggtcaaggcgatggaggagcgcgggatcggccgcccgtcaacgtacgccgcgaccgtg
ggcacgatccaggaccgcggctacgtgcgcaccaagggcaccgccctggtgccgacgtgg
ctggcgttcgccgtcacccggctgctggaggagcacttcccctccctcgtcgactacgac
ttcaccgcctccatggaggagggcctggacctcatcgcctccggcgatcgcggccgggtg
gagtggctcaacaagttctacttcggcgccaccgggcagaccgtcgagggactgcgcgag
atggtcgaacacctcggtgagatcgacgctcgcgagatctccaccattgacctcggcgac
ggcatggtcgtgcgggtcggccgctacggcccgtacgtcgagcaggtcgtgcccgtcggc
gtcgaccccgcgaccggcgaggtcaccggcgaggcgcccgacccggacgccaagccgcgg
cgcgccaccatcggcgacgacgtcgcccccgacgagatgtcgccggagaaggcgcgcgag
ctgctcgcgaccgccgacgacgacggtcgggtgctgggcaaggacccggagagcggccac
gagatcatcgcccgcgcgggccgttacgggccgtacgtgaccgaggtgctgccggaggag
ccggaggccgacaagccggccaagggcaagaagaaggccgccaaggccaagccgcggacc
gcgtcgctcttcaaggagatggacctggcgaccatcgagctggacgccgcgctgaagctg
ctcagcctgccccgggtcgtcggcacggtcaccgagggcgagggcgacgaggccacacag
gtcgagatcaccgcgcagaacggtcgctacgggccctacctgaagaagggcaccgactcg
cgctcgctcgtcaccgagcagcagctcttcgacatcacgctcgaggaggccgtcgcgatc
tacgccgagcccaagcgccggggtcgcgccgcgacgccgccgttgaaggagctgggtgag
gacccggtgtccggcaagccggtggtggtcaaggacggccgattcggcccgtacgtcacc
gacggcgagagcaacgcgacgctgcgcaaggacgacgacccggagtcgatcacgccggag
cgcggcttcgagctgctcgccgagaagcgtgcgaagggtccgacgacccgcaaacgcacg
gtgaagaagacggcgaagaagtccacggccaaaaagagcgccgccaagaagaccacggcg
aagaagacggcggccaagagcagctga
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