Allobranchiibius sp. GilTou73: LVQ62_07550
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Entry
LVQ62_07550 CDS
T07800
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
alx
Allobranchiibius sp. GilTou73
Pathway
alx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LVQ62_07550 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alx03400
]
LVQ62_07550 (xseA)
Enzymes [BR:
alx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LVQ62_07550 (xseA)
DNA repair and recombination proteins [BR:
alx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LVQ62_07550 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
UIJ36213
LinkDB
All DBs
Position
complement(1488278..1489513)
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AA seq
411 aa
AA seq
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MTAPLPEKAADTTAEQPWPVRTLSMRISEYVDKMSPLWVEGQIVQLQRRPGAPTCYVTLR
DPDVDMSLSVTVHVNTLDAMGPGIGPGARVVVQAKPTFWTKRGSLHLDARQMRPVGVGDL
LLRLEHLKQLLRSEGLFDVSRKRPLPFLPRRVGLICGRASAAEKDVVENTRLRWPATQFE
IRQVAVQGPGTVEQVGAALAELDAAPDVDVIVIARGGGAFEDLLPFSNEALLRAVSAART
PVVSAIGHDVDTPLLDFVADLRASTPTDAARRVVPDLAEQHAGLDRLLDRAARSLRHHAA
IERRHLDQLCAAAALRDPITMVTRRADAVQQLRARSSSVVTRRLDRAHDQVGHLAGQLRA
LSPWEVLQRGYAVVRTQDGEVVTDVAQVAPSDLLRVTVAQGDFAVRPVTKP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgccgcttccggagaaggccgccgataccaccgccgagcagccctggccggtg
cgcaccctgtcgatgcggatcagcgagtacgtcgacaagatgtcgccgctgtgggtcgag
ggccagatcgtgcagttgcagcggcgaccgggcgctccgacctgttacgtcactctgcgc
gaccccgacgtggacatgtcgctgtcggtgacggtgcacgtcaacaccctcgatgcgatg
ggtccgggcatcggacccggcgcccgggtggtggtgcaggccaagccgacgttctggacc
aagcgcggttctctgcacctggacgcccggcagatgcgaccggtcggcgtcggcgatctc
ctgctgcgcctggagcacctcaaacagctgctacgcagcgaagggctcttcgacgtctcc
cgcaaacgtccgctgccgttccttccgcgccgggtcggcctgatctgcggtcgtgcgagc
gccgccgagaaggacgtcgtggagaacacccggctgcgctggcccgcaacgcagttcgag
atccggcaggtagccgtgcaggggccgggcactgtcgagcaggtgggtgcggccctggcc
gagctggatgccgcgccggacgtcgacgtcattgtgatcgcccggggcggtggcgcgttc
gaggatctgctgcccttcagcaacgaggccctgctacgcgcggtctccgccgcgcgcacc
ccggtggtgagcgccatcgggcacgacgtcgacacaccgctgctcgacttcgtggcggat
ctgcgcgcctcgacccccaccgacgccgcacgccgggtcgtgcccgacctggccgagcag
catgctgggctggacaggctgctcgatcgagccgcgcgctcactgcgtcaccacgcagcc
atcgagcgacggcacctggatcagctgtgcgcggctgcggcgctgcgcgacccgatcacc
atggtgacgcgccgggcggacgcggtgcagcaactgcgcgcacgctcctcctccgtcgtg
acccgccgtctggaccgggcgcatgatcaggtgggtcacctcgccggtcagctgcgggcg
ctgtcgccctgggaggtgctccaacgcggttacgccgtcgtgcgcacccaggacggcgag
gtcgtcaccgacgtcgcccaggtggcgccgtccgatcttctgcgggtcaccgtcgcccag
ggcgacttcgcggtgcgcccggtgacgaagccgtga
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