Allobranchiibius sp. GilTou73: LVQ62_08365
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Entry
LVQ62_08365 CDS
T07800
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
alx
Allobranchiibius sp. GilTou73
Pathway
alx00521
Streptomycin biosynthesis
alx00523
Polyketide sugar unit biosynthesis
alx00541
Biosynthesis of various nucleotide sugars
alx01055
Biosynthesis of vancomycin group antibiotics
alx01100
Metabolic pathways
alx01110
Biosynthesis of secondary metabolites
alx01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LVQ62_08365 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LVQ62_08365 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LVQ62_08365 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LVQ62_08365 (rfbB)
00525 Acarbose and validamycin biosynthesis
LVQ62_08365 (rfbB)
Enzymes [BR:
alx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LVQ62_08365 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Sacchrp_dh_NADP
DapB_N
Motif
Other DBs
NCBI-ProteinID:
UIJ36361
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Position
1652834..1653862
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AA seq
342 aa
AA seq
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MRVLVTGGAGFIGSNFVHLTRRTRPDAQVTVLDAMTYAGHEQSLAGTGAALVRGDVADAD
LVDRLVADADLVVHFAAESHNDNSLREPWPFVQTNVVGTYTLLEAVRRHDVRYHHISTDE
VYGDLALDDPHRFTEATAYNPSSPYSSTKGASDLLVRAWVRSFGVRATLSNCSNNYGPRQ
HVEKFIPRQITTLLDGGRPRLYGDGMNVRDWIHVDDHNDAVWTIVERGEMGATYLIGADG
EADNLTVVRTLLDLMGRPGDDFEHVTDRPGHDRRYAIDSTRLRTELGWTPRYGDFRAGLA
ATIDWYRDNEDWWRPAKAATEAGYAAAGETAVPQDRAGEVPR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgtcctggtgacgggcggggccggtttcatcggtagcaacttcgtccacctgacg
cggcgcacccgccccgacgcgcaggtcacagtgctcgacgcgatgacctacgccgggcat
gagcagtcgctcgccggcaccggcgcggccctggtccgcggcgatgtcgccgacgccgac
ctggtcgaccggctggtcgccgacgccgacctcgtcgtgcacttcgcggccgagtcgcac
aacgacaactcgctgcgcgagccctggcccttcgtgcagaccaacgtcgtcggcacctac
acgctgctggaggcggtgcggcgacacgatgtgcgctaccaccacatctccaccgacgag
gtctacggcgacctggcgctggacgacccgcaccgcttcaccgaggcgaccgcgtacaac
ccctcgagcccctactcctcgaccaagggcgccagcgacctgctggtccgggcgtgggtg
cgctccttcggggtccgcgcgaccctgtcgaactgctccaacaactacggcccgcgccaa
cacgtggagaagttcatcccgcgccagatcaccacgttgctcgacgggggtcgcccgcgg
ctctacggcgacggcatgaacgtgcgcgactggatccacgtcgacgaccacaacgacgcg
gtgtggacgatcgtcgagcggggcgagatgggggcgacctacctgatcggcgccgacgga
gaggccgacaacctcacggtggtgcgcaccctgctggacctgatgggccgcccgggcgac
gacttcgagcatgtgaccgaccggccgggtcacgaccgccggtacgcgatcgactccacc
cgcttgcgcaccgagctcggctggactccgcgctacggcgacttccgggcgggactcgcc
gcgacgatcgactggtaccgcgacaacgaggactggtggcgccccgcgaaggcggcgacg
gaggccggatacgccgcggccggtgagaccgccgtgcctcaggaccgcgccggcgaggtc
cctcgatga
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