Allobranchiibius sp. GilTou73: LVQ62_10490
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Entry
LVQ62_10490 CDS
T07800
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alx
Allobranchiibius sp. GilTou73
Pathway
alx03030
DNA replication
alx03430
Mismatch repair
alx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVQ62_10490
03430 Mismatch repair
LVQ62_10490
03440 Homologous recombination
LVQ62_10490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alx03032
]
LVQ62_10490
03400 DNA repair and recombination proteins [BR:
alx03400
]
LVQ62_10490
Enzymes [BR:
alx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVQ62_10490
DNA replication proteins [BR:
alx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVQ62_10490
DNA repair and recombination proteins [BR:
alx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVQ62_10490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UIJ33598
LinkDB
All DBs
Position
complement(2110568..2112295)
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AA seq
575 aa
AA seq
DB search
MPTAHAIQATFDDLGTPLSGVTFVVVDLETTGGNPRSNRITEIGAVKVRGGEVLGEFQTL
VNPGGPIPAFISVLTGITDSMVASAPGIAAALPAFLEFAAGSVLVAHNAPFDIGFLRANC
AELGHPWPGHQVLDTVHLARQLVSRDEVPNRKLGSLAQLFGATITPDHRALHDAQATVDV
LHALLGRVGNLGVHTLEELASYTSRVRPEQRRKRYLADDLPRAPGVYIFKDDRARVLYVG
TSVDIQRRVRSYFTASEHRSRMAQMVGLATSVTPIVCATVLEAQVRELRLIAEHKPRFNR
RSRHPEKGVWLKLTVETFPRLSVVRETRDDGAEYAGPFGSRAMAEMAAAAVHEVVPLRQC
TKRLSATTTSSSCALAEMGRCGAPCTGQQSPQDYAQVAARVAEAIGGDARPLVDDLHERM
RRLCESERFEEAATVRDRMLALVRAADRAQRMAPLTASPEVVAARPGAVGGWEFVCVRYG
KLAGTTLSPPGADPRPYIDALVDSAEVVARPVGRAPATHPEETEKILRWLETPQVRMVRI
EGEWSCPVHGAGEVREQLEPLMSRVDNGFETSAMA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgcacacgccatccaggcgaccttcgacgatctgggcacaccgctgtccggg
gtcaccttcgtcgtggtcgacctcgagacgaccggtggcaacccgcgatccaacaggatc
accgagatcggcgcggtcaaggtgcgcggcggcgaggtgttgggcgagttccagacgctg
gtcaaccccggcggtcccatcccggcattcatctccgtgctcaccggcatcaccgactcg
atggtcgctagcgcaccgggtatcgccgccgcgctgccggccttcctggagttcgcggcc
ggcagcgtgctggtggcgcacaacgcacctttcgacatcggcttcctgcgtgccaactgc
gccgaactcggccacccctggcccgggcaccaggtgctcgacaccgtccacctcgcgcgc
cagctggtgagccgcgacgaggtgcccaaccgcaagctcggctccctggcgcagctcttc
ggggccaccatcacccccgaccaccgcgcgttgcacgacgcccaggccaccgtcgacgtg
ctgcacgccctgctcgggcgggtcggcaatctgggggtgcacaccctggaggagctcgcg
tcctacaccagccgggtccgcccggagcagcgacgtaagcgctacctggccgacgacctg
ccccgggcgccgggtgtctacatcttcaaggacgaccgtgcgcgggtgctctacgtcggc
acctccgtcgacatccagcgccgggtccgcagctacttcacggcgagcgagcatcgttca
cggatggcgcagatggtggggctcgcgaccagcgtcaccccgatcgtgtgcgccacggtg
ctcgaggcccaggtgcgcgagttgcggctgatcgccgagcacaagccgcggttcaacagg
cggtcgcgccacccggagaagggtgtgtggctgaagctcaccgtcgagaccttcccccgg
ctctcggtggtgcgcgagacgcgtgacgacggcgccgagtacgccggaccgttcggctcg
cgcgcgatggccgagatggcggcggccgccgtgcacgaggtggtgcccctgcggcaatgc
acgaagcggttgtccgcgacgaccacctcctcgtcctgcgcgctcgccgagatgggccgg
tgcggagcgccgtgcacgggtcagcagagcccgcaggactacgcccaggtcgccgcgcgc
gtggcggaggccatcggtggcgatgcccggccgctggtcgacgatctgcacgagcggatg
cgccgattgtgcgagagcgagcgcttcgaggaggcagccacggtgcgcgaccggatgctg
gccctggtccgcgccgccgaccgcgctcagcggatggcgccgttgactgcgagccccgag
gtcgtggcggcacgcccaggtgccgtcggcgggtgggagttcgtgtgcgtgcgctacggc
aagctcgccggcaccacgctcagtccgcccggtgccgacccgcgtccctacatcgacgcc
ctggtcgactccgccgaggtggtggcccgcccggtcgggcgcgcaccggcgacccatccg
gaggagacggagaagatcctgcgctggctggagaccccgcaggtgcggatggtgcggatc
gagggtgagtggagctgcccggtgcacggcgccggtgaggtccgcgagcagctcgaaccg
ctgatgagccgcgtcgacaacggtttcgagacctctgcgatggcctga
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