Allobranchiibius sp. GilTou73: LVQ62_10880
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Entry
LVQ62_10880 CDS
T07800
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
alx
Allobranchiibius sp. GilTou73
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alx03016
]
LVQ62_10880
Enzymes [BR:
alx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LVQ62_10880
Transfer RNA biogenesis [BR:
alx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LVQ62_10880
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UIJ33669
LinkDB
All DBs
Position
complement(2194715..2196025)
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AA seq
436 aa
AA seq
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MTPTGDEAPVETESAAEQDAPSYPMLDSPADGVPDVIVDERALTAAADAIAAGHGPVALD
AERASGFRYGNRAYLVQLRREGAGLFLIDPIACPDLSPVNDAIGDAEWVLHAATQDLACL
AEVGLRPRALFDTELGGRIAGLKRVGLAAVIEHYLGVTLAKEHSAADWSTRPLPEPWLRY
AALDVEVLTQVRDLMYADLEASGKLDWALQDFEALLSFTGPPVRTDPWRRTSGMHKIRER
RALARVRELWQTRDALARDKDIAPGRLLPDALIVAMATTPPTSAEELSALGAAPPAPGAP
PRRSRKPHHGLLRYQRDWLAALQRVRVMSERALPPASVRGDGPPPVRAWADRNPVAAARL
SQVRDRLGTFGEEHSVPLENLVTPESLRRLIWNASKVWDESMIREQLASYGARPWQVDAV
TPLVVQAVEDHPATDE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaccggagacgaggcgcccgtcgagaccgagagcgcggcggagcaggacgct
ccgtcgtacccgatgctggacagtcctgccgacggcgttcccgacgtcatcgtcgacgag
cgggccctgaccgccgcggcggacgccatcgcagcaggtcacggacccgtcgccctggac
gccgagcgcgcctcgggattccgctacggcaaccgtgcctacctggtgcagctgcgccgc
gaaggcgccgggctcttcctcatcgacccgatcgcgtgccccgacctgtcgcccgtcaac
gacgccatcggggacgccgagtgggtgctgcacgcggccacccaggacctggcctgcctg
gccgaagtcggcctgcgcccccgggccctcttcgacaccgagctgggcggtcgcatcgcc
gggctcaaacgcgtcgggctcgcagccgtcatcgagcactacctgggagtgactctcgcc
aaggagcattcggcggccgactggtccacccgcccgctgcccgagccctggctgcgctac
gccgcgctcgacgtcgaggtgctgacccaggtgcgtgacctgatgtacgccgacctagaa
gccagcggcaagctcgactgggccctgcaggatttcgaggcgctgctgtcgttcaccggg
ccgccggtgcgcaccgacccgtggcgccgcacctccggtatgcacaagatccgcgaacgc
cgcgccctcgctcgcgtgcgcgagctgtggcagacgcgcgatgccctcgctcgcgacaag
gacatcgcaccgggccggttgctgccggatgccctcatcgtcgcgatggccacgaccccg
ccgacctcggccgaggagctgagcgccctgggcgccgcgccgcccgcccccggcgctccc
ccacgcaggtcccgcaagccgcatcacggattgctgcgctaccagcgcgactggctggcg
gcactgcagcgcgtgcgcgtcatgtccgagcgcgcgctgcctcccgcctcggtgcgcggc
gacggtccgccgcccgtgcgggcgtgggccgaccgcaaccccgtggccgccgcccgcctg
tcccaggtgcgcgaccgactcggcaccttcggtgaggagcacagcgtccctctggagaac
ctcgtcacacccgagagcctgcgccgcctgatctggaacgcctcgaaagtgtgggacgag
agcatgattcgcgagcagctggcgtcgtacggcgcccgcccctggcaggtcgacgccgtg
acgccgctggtcgtgcaggccgtcgaggatcacccggctactgacgagtaa
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