Allobranchiibius sp. GilTou73: LVQ62_12665
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Entry
LVQ62_12665 CDS
T07800
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
alx
Allobranchiibius sp. GilTou73
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
alx03051
]
LVQ62_12665 (pafA)
Enzymes [BR:
alx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LVQ62_12665 (pafA)
Proteasome [BR:
alx03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LVQ62_12665 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UIJ33985
LinkDB
All DBs
Position
complement(2564433..2565794)
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AA seq
453 aa
AA seq
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MERRIFGIENEYGVTCTSAGQRRLSPDEVARYLFRKVVSWGRSSNVFLGNGSRLYLDVGS
HPEYATPECDDIREAVIHDKAGERILEGLVEEAQLRLAEEGVEGQIYVFKNNTDSAGNSY
GCHENFLIGRQGEFQAVSDVLIPFLVSRQIICGAGKISMLGHKPTYCVSQRADHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTTLLKLGSAHLVLQMIEAGAPM
RDLSLENPIRAIREISHDITGRTPVRLSNGKEMSALQIQSEYFERARAFAEKEGISDPVT
KQVLDLWQRTLTAIDTDDLGMVDTEIDWVIKHRLLDQVAAKHGLGLDDPRLQQIDLTYHD
INRRRGLFYLLQRRGKAARVCTDPEVFAAKTFPPQTTRAKLRGDFIRSAQAHRRDFTVDW
VHLKLNDQAQRTVLVKDPFSAQDPRVERLIDGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtcgcatcttcggtatcgagaacgagtacggcgtcacctgcacctccgcaggg
cagcgtcgactctccccggacgaggtcgcgcgctatctcttccgcaaggtcgtctcatgg
ggccgctcctcgaatgtgttcctgggcaacggttcccggctctatctcgacgtcggcagc
cacccggagtacgccacccccgagtgcgatgacatccgcgaggccgtcatccatgacaag
gccggcgagcggatcctggagggcctggtcgaggaggcgcagctgcgcctcgccgaggag
ggcgtcgagggtcagatctacgtcttcaagaacaacaccgactccgccggcaactcctac
ggctgccacgagaacttcctgatcggtcggcagggggagttccaggccgtctccgacgtg
ctcatcccgttcctcgtgagccgtcagatcatctgcggggccggcaagatatcgatgctc
gggcacaagccgacgtactgcgtcagccagcgagcggaccacatctgggagggcgtgagc
agcgcgacgacccgctcgcggcccatcatcaacacccgcgacgagccgcacgcggacgcc
gagcgctaccgccgactgcacgtcatcgtcggcgacagcaacatgagcgagaccaccacc
ctgctcaagctcggctcggcacacctcgtgctgcagatgatcgaggccggcgcgccgatg
cgcgacctgagcctggagaacccgatccgcgcgatccgggagatcagccacgacatcacc
ggtcgtacgccggtgcgcctttccaacggcaaggagatgtcggcgctgcagatccagagc
gagtacttcgagcgcgcgcgggcgttcgccgagaaggagggcatcagcgacccggtgacc
aagcaggtgctcgacctgtggcagcgcacgctgaccgccatcgacaccgacgacctgggc
atggtcgacaccgagatcgactgggtcatcaagcaccgcctgctcgaccaggtcgccgcc
aagcacgggctggggctggacgacccgcggctgcagcagatcgacctcacgtatcacgac
atcaaccgccgccgcgggctcttctacctgctgcaacgccgcgggaaggccgcccgagtg
tgcaccgacccggaggtcttcgcggccaagaccttccccccgcagaccacccgcgccaag
ctgcgcggcgacttcatccggtccgcccaggcgcaccgtcgtgacttcacggtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcacggtgctggtcaaggacccgttctcc
gcacaggaccctcgcgtggagcggctgatcgacggcatgtga
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