Allobranchiibius sp. GilTou73: LVQ62_16765
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Entry
LVQ62_16765 CDS
T07800
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alx
Allobranchiibius sp. GilTou73
Pathway
alx03420
Nucleotide excision repair
alx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LVQ62_16765
03430 Mismatch repair
LVQ62_16765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alx03400
]
LVQ62_16765
Enzymes [BR:
alx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVQ62_16765
DNA repair and recombination proteins [BR:
alx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVQ62_16765
MMR (mismatch excision repair)
Other MMR factors
LVQ62_16765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UIJ34724
LinkDB
All DBs
Position
complement(3406021..3409344)
Genome browser
AA seq
1107 aa
AA seq
DB search
MTPRLGAAHLADQLGLPAPTAEQTAVIEAAPDEPLLVVAGAGSGKTETMASRVVWLVANR
FVQPAEVLGLTFTRKAAGELAERVGRRLRQLTAVGLWEPPVDADGTRSLADIPTVQTYHS
YAGRIVSEHGLRLGIEPDSRLLSEAASWQLAAEVVSAYDGPMERVDKMESTVVAAVVDLA
GELAEHLRSTDEARDYLEEVVRHIEGLPATGRIKALSQADRLLPAALQARIDLLPIIDRY
QAAKRARTSLDFADQVAVAARLARSFPDVGAAERARYRAVLLDEFQDTSEAQLVLLRSLL
VAPGEPVPVTAVGDPHQSIYGWRGASATSLSSYAREFGGEHGTRQLPLATSWRNDVAVLD
VADRTAQPLREEGLPVEPLRPRPGAQTGAVDAARCETSDDEAQQVAGWVAQRWFDDRGRH
TGATAAVLCRKRSLFRSVVEHLERAGLPVEVVGVGGLLTTPEVGDVVSLLWAVQDPTRGD
RLMRLLTGPAMRLGAADLAGLYARARELSFQESGTRRAGDLEQDSREQPSIVETLERLPN
AQWRGREDERIGDVALHRLHWLAGLIRRVRSMTALPLPELVGEAERLLGVDLEVLSRAEH
TPGSARVHLDAFADVAAQFTAQAERPTLSGFLSWLDAALREERGLETTFLEANTAAVQVL
TVHAAKGLEWDYVAVPGLVEGTFPAHSNPPTWKKQHDGWAIGASGEPDLHHTWATTDTGW
TGGLSGLPYDLRGDVDGLPEFEWAADDIAGFREAVTDFKGRGGAHAIAEERRLAYVAFTR
ARHGMLLTGAVWGAGKKPRLTSRFLLELVDAGLVRRGEWVDLPADPEAVNPADDDDRTAT
WPGDPMASRRATLHDGVERVRAALERATVDGPVALPDDGRTHRLRVLLAEREAQRARREQ
HVVLPGHLSTSALVALAQDPEQFALDVRRPMPAAPALAARRGTAFHAWVEQHFQRAALLD
ISSLPGSGDDDADLDADLEAMKARFLASEWADRTPVDVEVALETWIDGISVRGRVDAVFP
SADGTGFVIVDWKTGRRPTGELAATRALQLAAYRIAYARLHGIDPESVQGAFYYAATGET
VHPPLPSVQEIAAVVGSIPAEHEPDRT
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccgcgactgggggcagcccacctcgccgaccagctggggctgccggcacccacc
gccgaacagacagcggtcatcgaggcggcgcccgacgagccgctgctcgtggtcgccggc
gccggatccggcaagaccgagacgatggcctcccgggtcgtgtggctcgtggccaaccgg
ttcgtccagcccgccgaggtgctgggcctgaccttcacccgcaaggccgccggcgagctc
gccgaacgcgtcgggcgccggttgcgccagctcaccgcggtgggtctgtgggagccgccg
gtcgatgccgacggcacccgcagcctcgccgacatcccgaccgtgcagacctatcactcc
tacgcgggccggatcgtctccgagcacggcctgcgcctcgggatcgagcccgactcccgc
ctgctgtccgaggcggcgtcctggcagctggccgccgaggtggtgagcgcgtacgacggg
ccgatggagcgggtcgacaagatggagtccaccgtcgtcgccgcggtggtcgacctcgcc
ggtgagctcgccgagcacctgcgcagcaccgacgaggcgcgcgactacctcgaggaggtc
gtgcggcacatcgagggcctgccggcgaccggccgcatcaaggcgctgtcccaggccgat
cgcctgctgcccgctgccctgcaggcgcgtatcgacctgctgccgatcattgatcgctac
caggccgccaagcgggcgcgcaccagtctcgacttcgccgatcaggtcgccgtggcggcc
cgcctcgcgcggtccttccctgacgtcggcgccgccgaacgggcgcgctaccgggcggtg
ctgctggatgagttccaggacaccagcgaggcccagctcgtgctgttgcgctcgctgctc
gtggcgccgggtgagcccgtgcccgtcacggcggtgggcgacccgcaccagtcgatctac
ggctggcgcggtgcgagcgcgaccagcctgtcgtcgtacgccagggagttcggcggcgag
cacggcacccgccagttgccgctcgcgacgagctggcgcaacgacgtggcggtgctcgac
gtcgccgatcgcacggcgcagccgctgcgcgaggagggactgccggtcgagccgctgcgc
ccccgaccgggcgcccagaccggcgccgtcgacgcggcacggtgcgagacctccgacgac
gaggcgcagcaggtggcggggtgggtcgcgcagcggtggttcgacgaccgtgggcggcac
accggcgcgaccgccgcggtgctgtgccgcaagcggtccctcttccggtcggtcgtcgag
caccttgagcgtgccggactgccggtcgaggtcgtcggcgtcggcgggttgctcacgacg
ccggaggtcggcgacgtggtgagtcttctgtgggccgtgcaggatccgacgcgcggcgac
cggttgatgcgattgctgaccgggcccgcgatgcgcctgggggcggccgacctggccggg
ctctacgcgcgggcgcgcgagctcagcttccaggagagcgggacccggcgcgcgggcgat
ctcgaacaggactcccgggagcagccgagcatcgtggagaccctcgagcgactgccgaac
gcgcagtggcgcggccgggaggacgagcggatcggggatgtcgcgctgcaccggctgcac
tggctggcgggcctgatccggcgggtgcggtcgatgacggcactgccgttgcccgagctg
gtcggggaggccgagcggctcctcggcgtcgacctcgaggtgctctcccgcgccgagcac
acgccggggtccgcccgcgtgcatctcgacgcgttcgcggacgtcgcggcccagttcacc
gcgcaggccgagcggcccacgctgagtggtttcctgtcatggctggacgccgcgctgcgc
gaggaacgcgggctggagacgacgttcctggaggccaataccgccgccgtgcaggtcctc
accgtgcacgcggccaagggcctggagtgggactacgtcgcggtgcccggcctggtggag
ggcaccttccccgctcattccaacccgcccacctggaagaagcagcacgacggctgggcc
atcggcgcctcgggcgagccggacctgcaccacacctgggccaccaccgacaccggctgg
accggcggactgtccggcctgccatacgacctgcgcggcgacgtcgacggcctaccggag
ttcgagtgggcagccgacgacatcgccggtttccgcgaggccgtgaccgacttcaagggg
cgcggcggcgcgcacgcgatcgccgaggaacgccggctggcctacgtcgcgttcacccgg
gcccggcacgggatgctgctgaccggcgcggtgtggggggccggcaagaagccgcgcctg
acctcgcgcttcctgctcgagctggtcgacgcaggtctcgtgcgccgcggcgaatgggtc
gacctgccggccgaccccgaggccgtcaaccccgccgacgacgacgaccgcacggcgacc
tggcccggtgaccccatggcgtcccggcgcgcgacgctccacgacggtgtcgagcgggtg
cgcgcggccctggaacgcgcgaccgtggacggaccggtcgccctgcccgacgacgggcgc
acccaccgcctgcgggttctgctcgccgagcgtgaggcgcagcgtgcccgccgcgaacag
cacgtcgtcctgccgggccacctgtccacctccgccctggtcgccctggcacaggacccc
gagcagttcgcgctcgacgtccgccgaccgatgcccgcggcgcctgcgctcgcagcccga
cgcggcaccgcgttccacgcgtgggtcgagcagcacttccagcgcgccgccctgctcgac
atctcctcgctgcccggctccggtgacgacgacgccgacctcgacgcggacctggaggcg
atgaaggcccggttcctcgcctcggagtgggccgaccgcactccggtcgacgtcgaggtg
gcactcgagacgtggatcgacgggatcagcgtgcgcggccgggtcgacgccgtcttcccg
tccgccgacggcacgggtttcgtgatcgtggactggaagaccggtcgtcgtccgaccggc
gagctggcagccacccgggcgttgcagctggcggcgtaccggatcgcgtacgcccggttg
cacggcatcgaccccgaatcggtgcagggcgcgttctactacgcggcgacgggggagacc
gtgcatccgccgctgccgagcgtgcaggagatcgccgcggtcgtgggctccatccccgcc
gagcacgaacccgaccgcacctga
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