Arabidopsis lyrata (lyrate rockcress): 110224737
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Entry
110224737 CDS
T01578
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110224737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
110224737
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110224737
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
110224737
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
110224737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
UvrD-helicase
Cas_Cas4
ResIII
UvrD_C
nSTAND3
Helicase_RecD
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
110224737
NCBI-ProteinID:
XP_020867252
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MPPRKKPKSSALKSNKQSSANHSSQPSNFGIQQLFLRHIQNSQSTSNSHTSTANPIEQQN
VNGLPSDTAVLTPQNPLGTLDEKPDDSKDMDQQLPEASPEISKNLKCSKFSPGTLIKQSQ
DDCGGEITWKFSPVNERLRAAAKQIPKMMELTENPVGVKSSTIRPCSLDKKQCPTSGITS
KVEQWLSSPSKKAFKRPAFATNRVMESVNPSPDAEFEIVNTSSSGNSPFQTPPSLSCPHN
KLPCTVTCSGACGSTGAGQHKKALLELLDQVEDVITVDDKTADDVGIVMPQVRVKDDIIS
SVVDCAVDEGPVTLPKMHTSINPDSYFLVLEVSEKRGSGGSSKGQCPYKVLRLLDEHTGV
ECALYLWDEWFYSTVSPGDSINVIGEFDGDGKCDVDRQNNFLIVHPDTLVAGTRVAASFG
CPRRTVLDERLRSNEHATVALLGTLQHQVFQAGLTQESPSVDGLQEYASIVIEQSIESLY
ACGVHEGDVRSTLFKVIPKMLNWIQHFRYSKDPGVSNVDFGSTIGKKMVKISEVIDIEEM
SWAPKYGLKGMIDASVRVIVESDMNTGNEKIMPLEFKSGKAPSGQSSMEHSAQVILYTLL
MSERYLKHIDNGLLYYLQSDQTQGISVQRSDLVGLIIRRNELANDILVASTTQQLPPMLR
NPNMCRYCRHLDVCTIYHKADGGNTESSGLGDVFDTHVSHLSTLHFNFLRHWDRLIDLEA
REMQLLRKDIAHPHGSKGSHSASYLSSMVLDMTNGFQHHNSHKETRFIYRFVRQNSSESR
ERVTSEDMIRTGTPATDDLDCKLRTGDRVILRTEVSHLTVANGIIADISRIHVSVSLSKR
LRLPWSEPSSEVSNLSHELWRIYKDEFMTSFSVMRFNLMQLFVQNGHNIRKMIVDLEPPR
FDNGSILSQDPAISYIWSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKA
LLIRGSSILLASYTNSAVDNLLIKLKAQGIEFLRIGRDEAVHEEVRESCFSAMNMCSVED
IKKKLDQVKVVASTCLGINSPLLVNRRFDVCIIDEAGQIALPVSIGPLLFASTFVLVGDH
YQLPPLVQSTEARENGMGISLFRRLSEAHPQAISVLQNQYRMCRGITELSNALIYGDRLC
CGSAEVADATLVLSTSSSTSPWLKKVLEPTRTVVFVNTDMLRAFEARDQNAINNPVEASI
IAEIVEELVNNGVDSKDIGIITPYNSQASLIQHAIPTTSVEIHTIDKYQGRDKDCILVSF
VRSREKPRSSASSLLGDWHRINVAITRAKKKLIMVGSQRTLSRVPLLMLLLNKVKEQSGI
LNLLPGDLKP
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaagaaagaagcccaagtcttcagctttgaaatcaaacaaacaatcttcagcc
aatcattcgtcacaaccttccaactttggcatccagcagttgttccttcgacatattcag
aactcccaatcaacttccaactctcatacctccactgccaacccaattgagcaacagaat
gtgaatggtcttccctctgacactgcagttttaacgcctcaaaaccctctaggcacattg
gatgagaaacctgatgattccaaggatatggaccagcaactcccggaggcatctcctgag
atctccaaaaaccttaagtgctccaaattctctcctggaacgctgataaagcaaagtcaa
gatgactgtggtggagagataacttggaaattctctcctgtaaatgaaagacttcgcgca
gctgctaagcaaattcctaagatgatggagttgacagaaaatccagtaggggttaaatct
tctaccattcgcccttgctctctggacaagaaacaatgtccgacatctggcataacttcc
aaggttgagcagtggttatcttccccctcaaaaaaagctttcaaaagaccagcttttgca
acaaatagggtcatggaaagcgtaaatccttccccagatgcggagtttgaaattgttaac
acttcaagtagtggaaacagtcctttccagaccccaccgtctctttcatgccctcacaac
aagcttccttgtactgtaacatgcagcggagcttgtggatctacgggggctggacaacat
aaaaaggccttgcttgaactgttagatcaagtggaggatgtcatcacagttgatgacaaa
acagctgatgatgtggggattgtgatgccccaagttcgagttaaagatgatatcatctct
tctgtcgttgattgcgctgtagatgaagggccagttactctaccaaaaatgcatacttcc
ataaatccagatagctatttccttgtattggaggtatcagagaaacgtggctcgggtggc
tcatctaagggtcaatgtccttataaggttcttcgcctgctagatgagcacactggagtg
gaatgtgcattgtatctctgggatgaatggttttacagcactgtatcaccaggagattca
atcaatgttattggagagtttgatggggatggcaagtgtgacgtggaccgtcaaaacaat
ttcttaattgttcatcctgatacccttgttgctggaactagggttgccgcaagttttggt
tgcccaaggcgaaccgtgctagatgagaggcttagatccaatgaacacgctacagtagcc
ttgcttggaaccttgcaacaccaagtttttcaggctggtctcacgcaagagtctccatct
gtagatggtttgcaggaatatgcaagcatagtgattgagcaaagtattgagagcttatat
gcatgtggagtgcatgaaggagacgtgagatcaactttatttaaagttatcccgaaaatg
ttgaattggattcagcattttagatattctaaggacccgggggtatcaaatgttgatttt
ggttctaccattgggaagaaaatggttaagatatcagaggttattgatattgaggagatg
tcatgggcccctaaatatggtctgaaagggatgattgatgcttctgtcagagtgatagtt
gaatctgacatgaacacagggaatgagaagataatgcctcttgagtttaaatctggaaaa
gctcctagtggtcagtcatcaatggaacattctgcacaggtgatcttgtacacgctcctt
atgtctgagaggtacctgaagcatattgacaatggccttctgtactatctacagtcagat
cagacccagggaatatctgttcaacgatcagatttggtgggtctgattattcgtcgtaat
gaacttgcaaatgacatccttgtggcgtcaacaacccagcaactgccgccaatgttacgg
aatcccaacatgtgccggtactgtcgccatctggatgtttgcacgatttatcataaggca
gatggtggaaacacagagagtagcggacttggcgatgtctttgacacacatgtttctcat
ctatcaactttgcatttcaatttcctccgacactgggacaggctaattgacttggaagct
agagagatgcagcttctacggaaagatattgcgcacccacatggttcaaagggcagccac
tcagctagttatctttcttcaatggttcttgacatgacaaatgggtttcagcatcataac
tctcataaagaaactagattcatctaccgttttgtacgtcaaaactcatctgaatctaga
gaaagagtaaccagtgaagatatgattaggactggaacccctgcaactgatgacctggat
tgcaaacttagaactggggatcgtgtgattcttcgcacagaagtcagccacctgaccgtt
gcaaacgggattatagcagatattagtcgcattcatgtatcagtttctttatccaagcga
ttacgtcttccttggagtgaaccttcttctgaggtatcaaatctctctcatgagttatgg
agaatttacaaagatgaattcatgacatcattttcggttatgaggttcaatctcatgcaa
cttttcgtacaaaatggacacaacatcaggaaaatgattgtggatcttgagcctcctaga
tttgacaatggatccatactaagccaggatcctgcaatatcatatatttggtcagaaaag
agtctgaataatgatcagcgccaagctatacttaagatactcactgcaaaggactatgct
ttgatattaggaatgcctggaacaggaaaaacctccacaatggttcatgctgttaaagct
ttgttgatcagaggctcatctattctgcttgcatcgtacacaaactctgctgttgataat
ctacttattaaactaaaagcacagggaattgagtttttacgcattggtagagatgaggct
gtacacgaagaagttcgagaaagttgcttttcagccatgaatatgtgcagtgtcgaggac
atcaaaaaaaagttggaccaggtcaaagttgtggcctctacatgtttgggaatcaatagt
cccttgcttgtgaataggcgatttgacgtatgcattattgatgaagctggccagattgcc
cttcccgtttcgatagggcccttgctgtttgcatctacctttgtacttgttggtgaccac
tatcaactaccgccactggtgcagagtacagaggctagagagaatgggatgggaataagc
ttgtttcgcaggttatcagaagcccatcctcaggcaatttcagtgttacaaaaccagtac
cgaatgtgtcgaggtattacggaattatcaaatgccttgatatatggagacagattatgc
tgcggttccgctgaagtagctgatgccacacttgttctttctacttccagttctacttcg
ccatggcttaaaaaggttctggagccaacaagaacagttgtatttgttaatacagatatg
ctgcgtgcttttgaagctagggatcagaatgcgatcaacaatccagttgaagcttccata
atagctgagattgtagaggagctagtaaacaatggagtggatagtaaagatattggaatc
attactccttataactcacaagcgagcctcattcaacacgcaattccgacaacttctgtg
gagatacatactattgacaagtatcagggaagagataaagactgcatattggtatctttt
gtgagatcgcgggagaaaccaagaagctctgcttcttcattgctcggagattggcatagg
atcaacgttgctataacacgagcaaagaaaaagttgataatggtgggatcacaaagaaca
ctctcaagagttccacttctgatgcttcttctaaacaaggttaaggagcagtcaggtatc
ttgaatcttttgccgggggacctaaaaccataa
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integrated database retrieval system
