Arabidopsis lyrata (lyrate rockcress): 110224811
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Entry
110224811 CDS
T01578
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110224811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
110224811
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110224811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
110224811
NCBI-ProteinID:
XP_020867756
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MSQDDEIVMRDVTNAGLCIGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV
GETWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGE
EQAICAVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPYAEISVQPLPD
YTISSDGVTMTCVTCTNKGRIFMAGRDGHVYELLYTTGSGWNKRCRKVCLTAGVGSMISR
WVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAYVFGPNGEGPLKKVAEERNLLN
QKDVSQGNRQSAVAGRSNKPSIVSISPLSMLESKWLHLVAALSDGRRMYLSTSSSGSGST
ISFSGFNNHRQTPNCLKVVSTRPSPPLGVGVGLGFGAASIAGRTQNEDLSMKIETAYYSV
GTLVLSDSSPPAMSSLLVVSRDSSVHSQVGSSSGPSSRSSRALREVVSSLPIEGRMLFVA
DVFPSPDTAATVQSLYSELEYCGIEVSGESYEKACGKLWARGDLSTQHILPRRKIVVFTT
MGMMELVFNRPVDILRRLLESNSPRSLLEDFFTRFGAGEAAAMCLMLAARIINFEDLISN
IVADKAAEAFEDPRIVGMPQFDGSSGLSNTRTATGGFSMGQVVQEAEPIFSGAHEGLCLC
TSRLLFPLWELSVMSKKTSPDTMSEEGVVICRLSTSAMHVLESKIRSLEKFLRSRRNQRR
GLYGCVAGLGDVTGSILYGTGSELGATERNMVRNLFGAYSNGGESANKRQRLPYSPAELA
ATEVRAMECIRQLLLRSAEALFLLQLLSQHHVARLVQELDANLKQALVQLTFHQLVCSEE
GDQIATRLIAAVMEYYTTSDGRGTVDDISGRLREGCPSYFKESDYKFFLAVERLERAALI
SDAEEKENVAREAFSFLSKVPGSADLRTVCKRFEDLRFYEAVVCLPLQKAQALDPAGDAF
NDQLDASIREHALAQRKQCYEIIANALRSLASPMLDEASRSQDICQIVHLGVQSTDRAFR
EYLYKAMIELGLENELLEYGGPDLVPFLQNAGSHSASQVGAVSNGSSPLGHSGTQISSNQ
AKYFDLLAKYYVSKRQHVLAAHVLLRLAERRAPSSGDNPTLDQRRQYLSHAVLQAKNASN
SDGLVGSAQGVSDSGLLDLLEGKLAVLQFQIKIRDKLVAIASNFESSVAMQDSDQNGGPV
LDGDSSDDSSLANAANEMAMELSSELKSVTQLYNEYAVPFELWEICLEMLYFANYSGDAD
SSIIRETWARLIDQALSQGGIAEACAVLKRVGSHIYPGDGVVLPLNVLCLHLEKAALERS
ERIENVGDEVIAKALLAACKGAAEPVLNAYDRLLSNAAIVPSPNLRIRLLCSVLVVLREW
AMSVLSDRMGSSPTRSSLILGGSFALENKAALNQGVRDKIANAANRYMTEVRRLALPPNK
TENVYAGFKELDESLLSPFSF
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagacgatgagattgtgatgcgtgatgtcacgaacgcgggactttgtattggt
gaccgcattggccgagaagccgcatcgcagctcgatttagaagaagctcttgaagcttct
agatacgctagtcacccatattccactcatcccagagagtggccgccgttgattgaggtt
ggtgagacttgggaattgccttctgtactcattgagaggtataatacagccggcggggaa
gggacggctttatgtggaatttttccagagattcgacgggcttgggcatctgtagacaat
tctttgtttttgtggcgttttgacaaaagggatgggcagtgtcctgagtatagtggggag
gaacaggcaatttgtgcggttggtctagcgaaatgtagacctggagtttttgttgaagct
attcaatatcttttggtgctggcaactcctgttgagttggttcttgttggagtgtgctgc
actgaaggacccgatggtagagatccttatgctgaaatttcagtacagcctctgcccgac
tatacaatatcatcagatggagtgacaatgacatgcgtaacatgtaccaataaagggcgc
attttcatggctggacgtgatggtcacgtatatgagctgctatatacaactggctcaggc
tggaataaacgttgtcgtaaagtttgtcttactgcaggcgtaggtagtatgatctcgagg
tgggttgtgccaaatgtattcaagtttggagctgtagatcctgttgtagagatggttgtc
gataatgaaaggcagattttatatgcccggactgaagagatgaaactccaagcatatgtt
tttgggccaaatggggaaggtcctcttaagaaggtggcagaagaaaggaatctattaaat
cagaaggatgtgagccaaggaaatcgtcagtcagcagtggcaggtcgatctaacaagcca
tccatagtcagcatttcaccattgtccatgctggaatcaaaatggttgcaccttgttgca
gcattatcagatggcaggaggatgtatctttccacctcctcaagtggaagtggtagtacg
attagcttcagtgggttcaacaaccaccgccagactccaaactgtctgaaagtggtttca
accaggccatctcctccactgggtgttggtgttggacttggttttggggccgcatctata
gccggtagaactcagaatgaagacctctctatgaaaattgaaacagcatactattctgtt
ggaactcttgtcctttcagattcatcgccacctgctatgtcttctcttcttgttgttagc
agagattctagcgtgcactctcaggttggcagcagttcagggccaagttcaaggagttct
cgggctttacgagaagttgtgtcctcccttcctattgaaggccgtatgctttttgtagca
gatgtgttcccgtctcctgatactgctgctactgttcaatcattatattcagaactagaa
tactgtggaatcgaagtctcaggagagtcttatgaaaaggcatgtggaaaactctgggcc
agaggtgatctttcgacccagcatattttgccaaggagaaagattgttgtttttaccacc
atgggtatgatggaacttgtttttaataggccggttgatatcttgagaagacttctggag
tccaattctccaaggtcccttctagaagattttttcacccgctttggagcaggcgaagca
gcagccatgtgcttgatgttggctgcccggataataaattttgaagatttaattagtaac
attgttgccgataaagcagctgaggcttttgaggatccgagaattgtaggaatgccacaa
tttgatggcagtagtggattgtcaaatactagaacagcaactggaggtttcagcatgggc
caagttgttcaagaagcagagcccattttctcaggtgctcacgaagggctctgcctttgt
acatcaagattattgtttcccctatgggaactttctgtgatgtctaaaaaaaccagtcct
gacaccatgtctgaggaaggagtggtgatttgtcgtctttctaccagtgctatgcatgtg
ctggaaagcaagattcgatcgttggagaaattcttaagatctagaaggaaccaaagaagg
gggctttatggatgtgttgctgggttaggagatgtgactggctctattttgtatggtact
ggttcagagttgggagctactgagagaaatatggttaggaacttgtttggagcatattcc
aacggaggcgagtcagctaataaaagacagcgattgccatatagtcctgctgaattggct
gccacagaggtgagggctatggagtgtattaggcagttgcttctcagatctgcagaagct
cttttcctactccaacttctttctcaacatcatgttgctagattagttcaggagcttgat
gcaaatctaaagcaagctttagttcagttgacattccatcagctagtttgttctgaagag
ggtgatcaaattgcaacaaggctcatagctgccgtgatggagtattatactacctcagat
ggcaggggaacagttgacgatattagcgggcgactacgtgaaggttgcccaagttacttc
aaggagtctgattacaaattcttcttagctgttgaacgccttgagagagctgctttaatc
tcagatgctgaagagaaggagaatgttgctagagaggcgttcagtttcttgagtaaggtc
cctggatctgcagatctccgaactgtctgcaaacgttttgaggatttgaggttctatgaa
gctgttgtctgcttgcctttgcagaaggcccaagctcttgatcctgctggcgatgctttc
aatgaccaacttgatgcttccataagagagcatgctcttgcccagcggaaacaatgctat
gagattattgccaatgccttgcggtctctagctagtcccatgctagacgaggcttcacgt
agtcaagatatatgccagatcgttcatcttggtgtgcaatcaactgacagagcgttccgg
gagtacctatacaaggccatgattgaactgggtcttgaaaacgagctcctggagtacgga
ggtccggatttggtaccttttctccagaatgctggcagtcattctgcatcacaggttgga
gctgtatctaatggatcatctccgctgggtcactcaggaacacagatttcatcaaatcaa
gcaaaatattttgatcttcttgcaaaatactatgtgtcaaagagacagcatgtgcttgct
gctcacgtgcttctaaggcttgcagagagacgtgctcctagttcaggagacaatcctacc
cttgatcaaaggcgacaatacctaagtcacgcagttttacaggccaagaatgcgagtaat
agcgatggtttagtaggttctgctcaaggtgtttctgacagtggattgcttgatctgctt
gaaggaaaactcgcagttcttcagttccaaattaagattagggacaaacttgtagctata
gcttccaatttcgagtcctcggttgccatgcaggactctgaccagaacggcgggccagta
cttgatggtgattctagtgatgattccagcttagcaaatgcagcaaatgaaatggccatg
gagctctcctcggaacttaaaagcgtaacacaattgtataatgagtatgctgtcccattt
gagctctgggagatctgtctggaaatgctctactttgccaactattctggtgatgctgat
tcaagtataataagggaaacatgggctagacttattgaccaagctctttcacaaggcggg
atagctgaggcctgtgcagttcttaagagagtcggatctcatatataccctggcgatgga
gttgttttaccgctcaacgttttatgccttcacctcgagaaagctgcacttgagagatca
gagaggattgaaaatgttggggatgaagtcatagctaaagctcttctagccgcttgcaaa
ggcgcagctgaacctgtgctcaacgcttatgaccgtttattatccaatgcagccattgtg
ccatccccaaatctaagaatccgcctcctttgttcggttctagtggtgctccgtgaatgg
gcaatgtctgtactgtcagacagaatgggctcgagtccaaccaggtcttctctaatacta
ggcggctcgtttgcgctagagaacaaagctgctcttaaccaaggggtccgtgataagatt
gcaaacgctgcaaacaggtatatgacagaggttaggagactggctctgccaccgaacaag
acggagaatgtatacgcaggtttcaaagaacttgacgagtctctcttaagtccattctcc
ttctga
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