Arabidopsis lyrata (lyrate rockcress): 110224866
Help
Entry
110224866 CDS
T01578
Name
(RefSeq) protein transport Sec1a-like isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
110224866
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
110224866
Membrane trafficking [BR:
aly04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110224866
SNARE
SNARE associated proteins
Syntaxin-binding proteins
110224866
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110224866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
NYN
Motif
Other DBs
NCBI-GeneID:
110224866
NCBI-ProteinID:
XP_020868115
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MRWWGEEAAKAAKIAVWWDMVECPIPEGFDARRVRPSLEAAFKKLGYSGPVSITAYGDQT
HTSVDLLRCLSSTGVAVLYIPDPLAGKINRIIRDTGLRDLGQLEQDLVFGDAGAKDVINF
LRTNQDTNPENKLRLLMIYATVYPEKFEGDKGVKLMQLARLSPVDMKVISNMQLIAGSPE
NKAKSGSFSLKFDAGKTKQANRKDRSGEEETWQLFRFYPMIEELLEKLVKGDLSKSDYLC
MNQSSHKEESEPRTGSVRKSSAPTAVPERKATPHSMRSRRTATWARPQSSDDGYSSDSVL
KSASTDFKKLGQRIFVFIIGGATRSELRVCHKLTSSLRREVVLGSTSFDDPPQYITKLKL
LSEKDIQGAPAQPFKPQYW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggtggggggaggaagcggcgaaggctgctaaaatagcggtgtggtgggacatg
gttgagtgtccgatacccgagggatttgatgctcgtcgggtccgtccgagtttagaagcg
gcattcaagaaacttggctactctggtcctgtctccattactgcctatggcgaccaaaca
cacacctctgttgacctcctgcgatgtctctcttccactggagtcgctgtgttgtacata
ccagatccgctagctggaaaaattaatagaataatcagagacacaggccttcgggatcta
gggcagctggaacaagatcttgtttttggagatgcaggtgccaaggacgttatcaacttt
ctgaggacaaatcaggacacaaacccggaaaacaaattacggctattgatgatttatgca
acagtgtaccccgagaagtttgaaggtgacaagggtgtaaagctaatgcagcttgctaga
ttatcacctgtggatatgaaggttataagcaacatgcaattgatagctggatctccagaa
aacaaggctaagtccggtagtttctccctcaaatttgacgctggaaagacaaaacaagca
aacaggaaagatcgatctggtgaagaagaaacatggcaactgttccggttttatcccatg
atagaggagctgcttgagaaactcgtgaaaggcgatctatctaaaagcgactatctatgt
atgaatcaatcaagtcataaggaggagagtgaaccaagaacagggtcagtaaggaagagt
tctgctcctacagcggttccagagcgaaaagccacccctcattctatgagatcaagacga
actgcaacttgggcgcgtcctcagtcttctgacgatggatactccagtgactcagtgttg
aaaagtgcttctacggacttcaagaagctggggcagcgcatctttgtattcattattggt
ggggcaactcgatccgagctccgagtttgccacaagttgacaagcagtttgaggagagaa
gtggtactaggctccactagtttcgacgatcccccacagtacatcacgaagctgaaattg
ctgtcggaaaaagacatacaaggggctcctgcccagcccttcaaaccacaatactggtga
DBGET
integrated database retrieval system
