Arabidopsis lyrata (lyrate rockcress): 110224984
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Entry
110224984 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110224984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
110224984
04147 Exosome [BR:
aly04147
]
110224984
04090 CD molecules [BR:
aly04090
]
110224984
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
110224984
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
110224984
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110224984
CD molecules [BR:
aly04090
]
Proteins
110224984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_21
Zeta_toxin
AAA_15
AAA_25
AAA_30
AAA_24
nSTAND1
AAA_7
DUF815
Motif
Other DBs
NCBI-GeneID:
110224984
NCBI-ProteinID:
XP_020868941
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MNRDGAGEGDSVSHEPSTSKSPKEEEVETKKEEKNDEKAKTVPFYKLFAFADSFDVLLMI
CGSIGAIGNGVCLPLMTLLFGDLIDSFGKNQNNKDIVDVVSKVCLKFVYLGLGTLGAAFL
QVACWMITGERQAARIRSTYLKTILRQDIGFFDLETNTGEVVGRMSGDTVLIQDAMGEKV
GKFIQLVSTFVGGFVLAFIKGWLLTLVMLTSIPLLAMAGAAMAIIVTRASSRGQAAYAKA
ATVVEQTIGSIRTVASFTGEKQAINSYKKFITSAYKSSIQQGFSTGLGLGVMFFVFFSSY
ALAIWFGGKMILEKGYTGGAVINVIIIVVAGSMSLGQTSPCVTAFAAGQAAAYKMFETIK
RKPLIDAYDVNGKVLEDIRGDIELKDVHFSYPARPDEDIFDGFSLFIPSGATAALVGESG
SGKSTVISLIERFYDPKAGEILIDGVNLKEFQLKWIRSKIGLVSQEPVLFSSSIMENIAY
GKENATVEEIKAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPR
ILLLDEATSALDAESERVVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKG
SHSELLKDSEGAYSQLIRLQEINKGNDVKPSDISAGSSFRNPSLKKSIEGSVISGGTSSA
GNSSRHHSLNVLGLSAGLDLSNGSQRVGQEETGTTSQEPLPKVSLTRIAALNKPEIPVLL
LGTVAAAINGAIFPLFGILISRVIEAFFKPADQLKKDSRFWAIIFVALGVTSLIVSPSQM
YLFAVAGGKLIRRIRSMCFEKAVXMEVGWFDEPQNSSGTMGARLSADAALIRALVGDALS
LAVQNVASAASGLIIAFTASWELALIILVMLPLIGINGFVQVKFMKGFSADAKSKYEEAS
QVANDAVGSIRTVASFCAEEKVMQMYKKQCEGPIKDGIKQGFISGLGFGLSFFILFCVYA
TSFYAGARLVEDGKITFNDVFQVFFALTMAAIGISQSSTFAPDSSKAKVAAASIFAIIDR
KSKIDSSDESGTVLENVKGDIELRHLSFTYPARPDIQIFRDLCLTIRAGKTVALVGESGS
GKSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQEPVLFNDTIRANIAYG
KGSEEAATESEIIAAAELANAHKFISSIQQGYDTVVGERGIQLSGGQKQRVAIARAIVKE
PKILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIAE
KGTHETLIKIDGGVYASLVQLHMTASN
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgacggcgccggagaaggcgactctgtttcacacgaaccatcaacatctaaa
agtcctaaagaagaagaagtagagactaagaaagaggaaaaaaacgatgaaaaggcgaag
acagttcctttctacaagctatttgcgtttgcagattcctttgatgtgctcttgatgata
tgtggctcaatcggagctattgggaatggtgtgtgtttacctcttatgacattgttgttt
ggtgatctcatagattcctttgggaaaaatcagaacaataaagacattgttgatgttgtc
tcaaaggtttgtcttaaatttgtctaccttggacttggaacacttggagcagcctttctt
caggtggcttgttggatgattacgggagagagacaagccgcgaggataagaagtacgtat
ctgaaaacaattctgagacaagacattggattcttcgatttggaaacaaacactggagag
gttgttggtagaatgtctggagatactgttcttattcaagatgccatgggtgaaaaggtt
gggaagtttattcagctggtatctactttcgtcggcggatttgttttagctttcattaaa
ggatggttactaacattggttatgttaacttcgatcccgcttctggctatggctggcgca
gccatggcgattatagtcactcgagcttcttctcggggacaagctgcttatgcaaaagca
gcaactgttgttgaacagactatcggatctatccgaacggttgcttcttttacgggagag
aagcaagcaataaacagctacaagaagttcataacatcggcgtataaatcaagcattcaa
caaggtttctccaccggtttaggactaggagtaatgttcttcgtgtttttcagcagctat
gctttggctatctggtttggtgggaagatgatactcgaaaaagggtataccggtggcgct
gtgatcaacgtgatcatcattgtggttgcgggttcaatgtcgcttgggcaaacatctcca
tgtgtaaccgcatttgcagcgggtcaagctgcagcatataagatgtttgagacgataaaa
agaaagcctttgattgatgcttatgacgttaatggaaaggttcttgaagatattcgagga
gacattgaacttaaagatgtgcatttcagttaccccgcgaggccagacgaggatatattt
gatggattctctctgtttatcccgagcggtgcaacagcagcgttagtaggagaaagtgga
agtggaaaatctacagtgatcagtttgattgagaggttttatgatccgaaagccggcgaa
atactcattgatggagttaatcttaaggaattccagttgaaatggatcagaagcaaaatt
ggattggtcagtcaagaacctgttctgttttcgtcgagcatcatggagaatatcgcctac
gggaaagaaaatgcaacggttgaagagattaaagctgcgacagaactagcaaatgccgcg
aagtttatagataagttgcctcaggggttggatacaatggtaggagaacatgggacacag
ctctcgggaggacagaaacagaggatagcgattgcgagagctattcttaaagatccgcgg
attttgctgctggatgaagcaacaagcgcgctcgatgctgaatccgaaagagttgttcaa
gaggctttagatagagtgatggttaaccgaactactgttatagtcgctcatcggttaagt
actgtcagaaatgcggatatgattgcggtaattcaccgtggaaaaatggtggaaaaaggt
tcacattctgagttgttgaaagattctgagggagcttattcgcagctcattcggttacaa
gagataaacaagggtaatgatgtcaaaccatcagacatatctgcgggatcatctttccgg
aacccgagtttgaagaaatcaatagagggatcggttatcagtggcggaacctcgtcggct
gggaatagcagccgtcatcattctttgaatgttcttggtttatctgcaggactagacctc
agtaacggtagccaacgagtaggccaagaggaaactggaacgactagtcaagaaccgctc
ccgaaagtatcactcacccgaatcgctgctcttaacaaacctgagatcccggttctcctt
ctaggaactgtagcagcagcaatcaatggcgctattttcccgctttttgggattctgatt
tcaagagtcatcgaagcgttcttcaaaccagctgaccaactaaagaaagattcaagattc
tgggcgattatatttgtagctcttggagtaacttcgctgatcgtctcaccgagtcaaatg
tatctgtttgcagtagctggcggaaaactgattagacgaattcgatcaatgtgctttgag
aaagcggtcnacatggaagttgggtggttcgatgagccacagaactcgagtggaacgatg
ggtgcaaggctatctgctgatgcagctttgattagggctctagttggagatgcattgtct
ctagctgttcaaaacgttgcatctgctgcgtctggattgattatagcattcactgcgagt
tgggaattggcccttataatcttggtgatgcttcctcttattggtatcaatggctttgtt
caagttaagttcatgaaaggattcagcgccgatgcaaagtcaaagtatgaggaggcgagt
caggtagcgaacgatgcagtggggagtataagaacagtcgcatctttctgtgcggaggag
aaagtgatgcagatgtataagaagcagtgcgaaggtccgataaaagatggaataaagcaa
ggtttcatcagtggattagggtttggattatccttcttcattctgttctgtgtctacgcg
acaagcttctacgcgggggctagattggttgaagatggcaagattactttcaatgatgtt
ttccaggtattctttgcgttaacaatggcagctatcgggatttctcagtcgagtactttt
gctccagattcgagcaaagctaaggttgctgctgcttcaatctttgcaatcatcgataga
aaatcgaagatagactcgagtgatgagtcagggacagtgttggagaacgttaagggagat
attgagctgcgtcacttaagcttcacttatccagcaagaccagacattcagatctttcgt
gatctttgcttaaccattcgcgcaggaaagacggttgctttggtaggagaaagcgggtcg
gggaaatcgacggtgatctcgctcttacaaagattttacgatccagattccggtcatata
actttagacggagttgagctcaagaagctgcaattgaaatggttgagacaacaaatggga
ctagtgggacaagaacctgtcttgttcaacgacacgatccgagccaatattgcttatggc
aaaggaagtgaagaggccgcaaccgagtctgaaatcatagccgctgcagaactcgccaat
gcacacaaattcatctctagcatacaacagggttacgacacagtggtgggagagagaggg
attcaattatcaggaggacagaaacagcgcgtagctatagcacgcgccatcgtgaaagag
ccgaagatattgcttttggacgaagcaacaagcgctcttgatgcggaatcagaacgagtg
gttcaggatgcgcttgaccgagtgatggtaaaccgaaccacgatagtggtggctcaccgg
ttatccactattaaaaacgctgacgtcattgccgtcgttaagaacggtgtgattgctgag
aaagggactcacgagacgttgatcaaaatcgacggcggggtttatgcttcacttgttcag
cttcacatgactgcttctaattga
DBGET
integrated database retrieval system
