Arabidopsis lyrata (lyrate rockcress): 110225421 Help Entry 110225421         CDS       T01578                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03013   Nucleocytoplasmic transport aly03040   Spliceosome Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110225421   09122 Translation    03013 Nucleocytoplasmic transport     110225421  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aly03019]     110225421    03041 Spliceosome [BR:aly03041]     110225421 Messenger RNA biogenesis [BR:aly03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      110225421 Spliceosome [BR:aly03041]  Complex C   Other components    EJC/TREX     110225421  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     110225421 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Mua gp37_trimer Motif Other DBs NCBI-GeneID:  110225421 NCBI-ProteinID:  XP_020870813 LinkDB All DBs Position Unknown AA seq 1812 aa AA seqDB search MSLPLLECKYVTEEFVREGKNGNYGTKLPSSVPMLRFLYELSWILVRGELPIQSCKAVLD GVEFLDKPSKEELASCFADVVTQIAQDLTMSGDQRSRLTKLAKWLVESQTVPLRLFQERC EEEFLWEADMVKIKAQDLKGKEVRLNTRLLYQQTKFNLLREESEGYAKLVTLLCRGSASS SHNASAATMGIIKSLIGHFDLDPNRVFDIVLDCFELEQDYDTFLNLIPIFPKSHASQILG FKFQYYQRLEVNSPVPVGLYKLTALLVKEEFINLESIYAHLLPKDDDVFEDYNVSSAKRF EEANKIGKINLAATGKDLMEDEKQGDVTVDLFAALDMESEAVTERLPELENNQTLGLLNG FLFVDDWYHANILFERLAPLNPVAHDQICSGLFRLIEKSITHAYRIARQTRVQNSSSAGT DKITHTANRTYLDLPKEVFQMLVTVGPYLYRNTQLLQKICRVLRAYYLSALDLVRDGSNQ EGSAYEVSRVHLKEVRLRVEEALGTCLLPSLQLVPANPAVGHEIWEVMSLLPYEARYRLY GEWEKDDERNPLLLAARQVAKETILVCQLDTRRILKRLAKENLKQLGRMVAKLAHANPMT VLRTIVNQIEAYRDMIAPVVDAFKYLTQLEYDILEYVVIERLAQSGRDKLKDDGINLSDW LQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELVQQMANVQYTENLTE DQLDAMAGSETLRYHATSFGMTRNNKALIKSSNRLRDSLLPNDEPKLAIPLLLLIAQHRS LVVVNADAPYIKMVTEQFDRCHGILLQYVDFLSSAVSPATAYARLVPSLDELVHTYHLEP EVAFLVFRPVMRLFKCRRNGDVSWPLDSGESMDADSEISESESSMILDVGASEKAVKWSD VLDTVRTMLPSKAWNSLSPDLYATFWGLTLYDLHVPRNRYESEISKQHAALKTLEEVADN SSSAITKRKKEKERIQESLDRLTGELKKHEEHVASVRRRLSREKDTWLSSCPDTLKINME FLQRCIFPRCTFSMADSVYCAMFVHMLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYE VGRLGRFLFETLKIAYHWKSKESVYEHECGNMPGFAVYYRYPNSQRVTFGQFVKVHWKWS GRITRLLIQCLESNEYMEIRNALIMLTKISGVFPVTRKTGINLEKRVAKIKNDEREDLKV LATGVAAALSARKPHWVTDEEFSMGFLELKAPPVHTPKHASSHASSQNGLLVGVSQGEPT GERATINQQPESGGLGKDQMLKTKPLDGRTESIPSKSDQGHLKSKGGNPLDAQPTMSRKS MEQKETDETPRIPDENPVKAPSKYSEAELKPSSKRSASVNKSTKQDFGKDDGKSGKAVGR TSTADKDLIYLESRQSGLTKALSSTAANGSIATGSSKVKDDGAEALDAQKQSSRTVHSPR HEIVTSVRSSDRLQKRTNAVEDSERISKRRKGDAEHKEHDSEPRSSDRDRSAEARLDLNK TVTDDQSTHRDQDRSKDKGYERQDREHRERVDRSDKPRGDDVEKARDKSLERHGRERSVE KGLDKGTTRSYDRNKDERNKDDRSKLRHSEASLEKSHPDDHFHSQGLPPPPPLPPNIVPH SMAAKEDLERRAGGARHSQRLSPRHDDRERRRSEENLSVSVDDAKRRRDDDIRDRKRDDR ETITVKGEEREREREREREREKSLPLKDDFEASKRRKLKREQQVPSAEPGEYSPMPHQSS LSTGMGPSSYEGRERKNSSMIQHGGYLEEPSIRLLGKEASSKMARRDPDPMYDREWEDDK RQRAERKRRDRK NT seq 5439 nt NT seq  +upstreamnt  +downstreamnt atgtctcttccgctactggagtgtaagtacgtgacggaggagtttgttcgtgaaggtaag aatggcaactatggaaccaagctgcccagctctgtaccgatgcttcgtttcctctacgag ctctcttggattttggttcgtggcgaattgccaattcagagctgcaaggcagtgttggac ggtgtggagtttttggataagccatccaaggaagagttagcttcttgttttgcggatgtt gtgactcagatagctcaagaccttaccatgtcgggagatcaacgttctcgcctaaccaaa ttggcgaaatggcttgtggaatcacagacagtccctctaaggcttttccaagagcgttgc gaggaggagtttctctgggaagctgatatggttaaaataaaggcccaagatttgaagggg aaagaggtgcgattaaacactcgccttctgtaccagcagacaaagttcaacttactccgt gaagaaagcgagggatatgccaaattggtcactcttttgtgccgaggatctgcaagttct tcgcacaatgcatcagcagcaacgatgggaattatcaagtcattaattgggcattttgac ctggatccaaaccgtgttttcgacatagttttggattgctttgaactcgaacaagactac gacacatttctcaatctaattcctatctttcctaagtctcatgcttcacaaattcttgga tttaaattccaatactatcagagattagaggtgaatagccctgttccagttgggctctat aagcttacagccttgctagtaaaggaagagtttatcaatcttgaaagcatatatgcacat ctgctacctaaggacgacgatgtttttgaagattataatgtttcttctgcaaagcgattt gaagaggccaataaaattggaaaaattaatctcgctgctactgggaaggatcttatggag gatgagaagcaaggagatgtcacagtagatctctttgctgctttagacatggaaagtgaa gctgttactgagcgattaccagagcttgaaaataatcagactctgggtcttcttaatggt ttcctctttgtggacgattggtatcatgccaatatcttgttcgagcgtcttgcgcctctt aatccagtggcacacgatcagatttgtagtggcttgtttaggcttatagagaagtcaatt actcatgcttatcgcattgctcgtcagacacgtgttcaaaattcttcttctgcgggtaca gataagatcacacacactgctaataggacttatctagatcttccgaaagaagtgtttcaa atgcttgttactgttggaccctacctgtaccgcaatacacaactgttgcagaagatttgt agagtattaagggcttactacttgtcggccttagatcttgttcgcgatgggtcaaatcaa gaaggtagtgcatatgaagtttctcgtgtgcacctgaaggaagttaggttgagagtggaa gaagctctaggaacatgccttctgccatcattacagttggtacctgcaaatccagcagtt ggacatgagatttgggaagtgatgagtctccttccatatgaggctcgttatcgcttatat ggtgagtgggaaaaggacgatgagcggaatcctttgttgttggcagcaaggcaagtggca aaggagactattctcgtatgtcagttggatactagaagaattctgaaacggcttgcaaaa gaaaatttgaagcagttaggaaggatggtggcaaaactagctcatgccaatcccatgacg gtgcttcggacaattgtaaatcagattgaagcatacagagatatgattgctcctgttgtg gatgccttcaagtacttgacacagcttgagtatgatatcttggaatatgtcgtgattgag agactggcacaaagcggacgagataaacttaaagacgacgggattaatttatcagactgg cttcaatctttggcatcattttggggtcatctgtgtaagaagtatccatcaatggagtta aggggtcttttccagtatctcgtgaaccagttaaagaggggccaagggatcgagcttgtt cttctccaggaactggtccagcagatggcaaatgtacaatacactgagaaccttaccgaa gatcagttggatgccatggcaggaagtgagactttacgttatcacgcaacatcctttggc atgacgcgaaacaacaaggcacttatcaaatcatcaaaccgtctgcgagattcgttactt ccaaatgatgaaccaaagttagctatcccccttttgttacttatcgcccagcatcgttct ctagttgtggtgaatgcggatgcaccatatattaagatggtcactgaacagttcgacaga tgtcatggaattcttctccaatacgtagacttcctttctagtgctgtcagtccggctact gcttatgctcggctggtaccttcgcttgatgagcttgttcacacataccatctcgaacca gaggtcgcttttttggtatttcgccctgtgatgaggctcttcaagtgtcgacggaatggt gatgtttcatggcctttggatagtggggaatctatggatgcggattctgaaatatcagag tctgagagttccatgattctcgatgtcggtgcatctgaaaaagctgtaaagtggtctgat gttcttgatacagtaaggacaatgctgccctcaaaagcttggaatagtctatcgccagac ctctacgctacgttttgggggcttacactttatgatctccatgttcccagaaatcgttat gagtctgagatatctaaacagcatgctgctcttaagacacttgaagaggttgctgataat tctagttcagcaattaccaagaggaaaaaagagaaggaaaggattcaagagtctcttgat cgtctaaccggtgaactgaaaaagcatgaagaacatgtggcttctgtccgtagaaggctt tcacgtgaaaaagatacatggttgagctcctgtcctgatactttgaagattaatatggag ttcctgcaacgttgtattttccctcgttgcacatttagcatggcagattctgtgtactgc gcgatgtttgtacatatgcttcactctcttggaacaccctttttcaacactgtcaaccac attgatgtactgatttgtaaaacgctgcaaccaatgatctgctgctgcactgaatatgaa gttggaagacttgggaggtttttgtttgagaccttaaagattgcataccactggaagagc aaagaatcagtctatgagcatgagtgcggaaacatgccagggtttgctgtttattataga taccctaacagccagcgtgtcacatttggacaatttgtgaaggtacattggaaatggagt ggaagaatcacacggcttttgatccagtgtctggagtctaatgagtatatggagattcgt aatgccctaattatgttaacaaaaatatctggtgttttcccagttactcggaaaactggg ataaaccttgagaaacgggtagccaagattaaaaatgatgagcgagaggaccttaaggtt ctagcaactggtgttgccgctgctctgtctgcaagaaaaccacattgggttacagacgaa gaatttagcatgggcttccttgaactaaaggctccgccagtacatactccaaaacatgcc tcttcccatgcttcttcccagaatggcttgttagttggtgtctcccaaggtgaaccaact ggggaaagagctactattaaccagcagcctgagtctggtggattgggcaaggaccagatg ttgaaaactaaacctctagatggaagaacggaaagtataccttcaaaatctgatcaagga catctaaaatcaaagggtggcaatccattggatgcccaacctaccatgtctaggaagtca atggaacaaaaggaaacagatgaaacaccccgaatacctgatgagaatcctgtcaaagct ccttctaagtattctgaagccgagttgaaaccttcctctaaacgaagtgcatcggtgaac aaatctacaaagcaagattttggaaaagatgatggaaagtccggtaaagctgttggaaga acatccacagctgacaaagatcttatttatctggagagcaggcaatcaggtttgaccaaa gctctttccagcacagcagccaatggtagcatagctactgggtcgtccaaagtaaaagat gatggtgctgaagctttggatgcacaaaagcaatcttctcggactgttcattcccctagg catgaaattgtcacttctgtgagatcgagtgataggttacaaaaacgaactaatgctgtt gaggatagtgaaagaataagtaaacgtcgtaaaggagatgctgagcacaaagagcatgac agtgagcctcgatcgagtgaccgagatagatcagcagaggctcgattggatttaaacaaa acagttactgatgaccaaagcacccatagggatcaagatagatcaaaggataagggttat gaaagacaggatagagagcacagagaaagagttgatcgttctgataaacctcgtggagat gatgttgagaaagcacgagacaaatccttggaacgtcatggaagagagcgctcagttgag aagggtctagataaaggaacaactaggagttatgatagaaacaaggatgaaagaaacaaa gatgatagaagcaaactgcgtcatagtgaggcatcacttgagaaatctcatcctgatgat cattttcattctcaaggtttacccccacctccacctttacctcctaacatcgttccacat tctatggccgcgaaagaagatctcgaaagaagggctggaggtgcaaggcattctcagagg ctttccccgaggcatgatgatagagagagacgacgctctgaagagaatttatcagtttct gtggatgatgcaaaacgtagaagagatgacgatattcgggaccgaaagcgagatgaccga gaaacaatcactgtgaagggagaagaaagagaaagggaaagagagagagaaagagaaaga gaaaagagcctccctttgaaagatgattttgaagcctccaagagaaggaagcttaagagg gagcaacaggtcccatctgcagagccaggagaatactctcctatgccacatcaatcgtct ttatcgactggtatgggaccatcatcgtacgaaggcagagagcggaagaacagtagtatg attcaacacggaggctatcttgaagagccaagcatcagacttcttggaaaagaagcttcc agcaagatggctcgtcgtgatcctgacccaatgtatgaccgtgaatgggaagacgacaag aggcagagagcagagcggaagcggagagatcggaagtag

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