Arabidopsis lyrata (lyrate rockcress): 110225434
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Entry
110225434 CDS
T01578
Name
(RefSeq) elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110225434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
110225434
03016 Transfer RNA biogenesis [BR:
aly03016
]
110225434
03012 Translation factors [BR:
aly03012
]
110225434
04131 Membrane trafficking [BR:
aly04131
]
110225434
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
110225434
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110225434
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110225434
Translation factors [BR:
aly03012
]
Eukaryotic type
Elongation factors
110225434
Membrane trafficking [BR:
aly04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
110225434
Exosome [BR:
aly04147
]
Exosomal proteins
Proteins found in most exosomes
110225434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
110225434
NCBI-ProteinID:
XP_020870839
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPRYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAVKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagtttcacatcaacattgtggtcattggccacgtcgattctggtaaa
tcgaccaccactggacacttgatctacaagttgggaggtattgacaagcgtgtcattgag
aggttcgagaaggaggctgctgagatgaacaagaggtctttcaagtacgcatgggttttg
gacaaacttaaggctgagagagagcgtggtatcaccattgacattgctctctggaagttc
gagaccaccaagtactactgcactgtcattgatgctcctggccatcgtgatttcatcaag
aacatgatcactggtacctctcaggccgattgtgctgtccttatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggtcagacccgtgagcatgctctccttgct
ttcacccttggtgtcaagcaaatgatctgctgttgtaacaagatggatgccaccaccccc
aggtactccaaggccaggtacgatgaaatcatcaaggaggtgtcttcctacttgaagaag
gttggttacaaccccgacaaaatcccgtttgtgcccatctctggattcgagggagacaac
atgattgagaggtccaccaaccttgactggtacaagggaccaactctccttgaggctctt
gaccagatcaacgagcccaagaggccatcagacaagccccttcgtctcccacttcaggat
gtctacaagattggtggtattggaacggtgccagtgggacgtgttgagactggtatgatc
aagcctggtatggtcgtgacctttgctcccacagggttgaccactgaggtcaagtctgtt
gagatgcaccacgagtctcttcttgaggcacttcccggtgacaatgttgggttcaatgtt
aagaatgttgccgtgaaggatcttaagagagggtacgtcgcctccaactcaaaggatgac
cctgccaagggagcagccaacttcacctcccaggtcatcatcatgaaccaccctggtcag
attggtaacggttacgccccagtcctcgattgccacacctcacacattgcagtcaagttc
tctgagatcttgaccaagattgacaggcgttctggtaaggagattgagaaggagcccaaa
ttcttgaagaatggtgatgctggtatggtgaagatgactccgaccaagcccatggttgtg
gagaccttctctgagtacccaccccttggacgttttgccgtgagggacatgaggcagact
gttgcagtcggtgtcatcaagagcgtggacaagaaggacccaaccggagccaaggttacc
aaggctgccgtcaagaagggtgcgaagtga
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integrated database retrieval system