Arabidopsis lyrata (lyrate rockcress): 110226196
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Entry
110226196 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110226196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
110226196
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110226196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
110226196
NCBI-ProteinID:
XP_020872588
LinkDB
All DBs
Position
Unknown
AA seq
146 aa
AA seq
DB search
MNIYATQKILTYQLKPLACSRNIFHRPHGSASWSEGDTKFLAAEYRPKAGTKKNENAEKA
CFEVIWKPXAGXIGKVEREYKTILKRTLQSICVLTVVPNTTTSVIIQVVHDGGSVSFLCS
LHLCKYLLMLSETHIIWYKQCLFEYL
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctacgctacgcaaaaaatacttacttatcagctgaaacctcttgcttgttcc
cgtaatatctttcatcgtcctcatggctctgctagttggtcagaaggggatacaaaattt
ctagctgcagaatacagacctaaagcaggaacgaagaagaacgaaaatgctgagaaggct
tgttttgaagtcatatggaagccttaagccggatagattggaaaagttgaaagggagtat
aaaacgatactcaaaaggacgttacagagtatttgtgttttgacagttgttccaaatacc
accacctcagtgataattcaggttgtacatgatggtggttctgtatcgtttttatgttcc
ttgcacctttgtaaatatttattgatgctgtctgaaacacatataatctggtataaacaa
tgtctgtttgagtatttatag
DBGET
integrated database retrieval system
