Arabidopsis lyrata (lyrate rockcress): 110226322
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Entry
110226322 CDS
T01578
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110226322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
110226322
03036 Chromosome and associated proteins [BR:
aly03036
]
110226322
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
110226322
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
110226322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
RMC1_N
WD40_MABP1-WDR62_1st
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
110226322
NCBI-ProteinID:
XP_020873127
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MDAGLNRCPLQEHFLPRKSSKENLDRFIPNRSAMDFDYAHFALTEGRKGNDQASAVSSPS
KEAYRNQLAETMNLNHTRILAFRNKPQAPVELLPSNHSSSLHQQPKSVKPRRYIPQTSER
TLDAPDIVDDFYLNLLDWGSANVLAIALGHTVYLWDASTGSTSELVTIDEEKGPVTSINW
APDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINN
DVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSNTQWLHRL
EEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNE
RELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN
VFGVPETAKKAAPKAVSEPFSHVNRIR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtttgaatcggtgcccacttcaagaacactttcttcccagaaaaagttcc
aaggaaaatcttgacaggttcataccgaatagatcagccatggatttcgactatgctcac
tttgccctcactgaaggaagaaaaggtaacgatcaggcatcagcggtaagttcaccatcc
aaagaggcctacaggaaccaattggctgagaccatgaatctcaatcacactcggattctc
gccttcagaaacaaacctcaagctcctgtagaactgcttcccagcaatcactcttcttct
cttcaccaacaacccaaatccgtcaagcctcgtagatacattcctcagacttctgagaga
accttagatgcacctgacattgtggatgacttctacctcaacttgctggactggggcagt
gctaatgtcctagccatagctttgggccacactgtttatttgtgggatgcttccactggt
tctacatctgagcttgtgaccattgatgaggagaagggacctgtcacaagtatcaactgg
gcacctgatggtcgtcatgttgctgttggactcaacaactctgaagtccagctttgggat
tctgcatctaaccgtcaactgagaacattgaagggtggtcaccagtcaagagtaggatca
ctggcatggaacaatcacatccttactactggaggaatggatgggctgatcattaacaat
gatgtgaggatcagatcacccattgttgaaacttacagaggtcacactcaagaggtttgt
gggctaaagtggtcaggatctggacagcaactagcaagtggaggcaacgacaatgtcgta
cacatatgggatcgttctgttgcttcctcaaactcaaacacgcaatggctgcacagactt
gaggaacatacatctgctgtgaaagctcttgcgtggtgccctttccaagcgaatttgctt
gcaactggtggtggtggaggagacaggacgataaaattctggaacactcacaccggggct
tgtttgaactcagtagacactggctcccaagtttgttcgttgttatggagcaagaatgaa
agagagttgcttagttcacatgggtttacacagaatcagctcacactttggaagtaccca
tccatggtgaaaatggctgagctcactggtcatacatcaagagttctatatatggcccag
agtccagatggttgtaccgtagcttcagcagcaggagatgaaactctgaggttctggaat
gtttttggagtaccagagaccgccaaaaaggctgctccaaaagcagtttccgagccattt
tctcatgtgaatcgtattcgttga
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