Arabidopsis lyrata (lyrate rockcress): 110226339
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Entry
110226339 CDS
T01578
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_12
AAA_30
Viral_helicase1
GluRS_N
PhoH
Motif
Other DBs
NCBI-GeneID:
110226339
NCBI-ProteinID:
XP_020873238
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MENLPPNRGMWNQEYSHGRISQSFRSTKPLLDRKRPLENAPNSSDQRMKESSMGTESLPP
HTNFNRTPLMELSTNTPYKRLKPAFESYADDYPCGLTTPPPRFDLDKEIINGFQTEISGD
SGFSSEAFVTPLKEPERVTLSYGCSTSSSLLDDDIDDSILEEIDLIYEQSARKAVCQTPS
TSINQTPSKDNKSSDLKASLDFRDVKKFEPDSNVKVKLDEETTIAADPALLNSMPDECSK
YIMSLNDRQRDAACSNISTPLMVIAGPGSGKTSTMVGRVLVLLNEGLLPSNILAMTFTTA
ATSEMRERIGKSAGKKAAKDITISTFHSFSLQLCRMHADKLQRTSEFSVYGHGQQRRAII
EAVRLYEEEKKNGSKTSVACESGEDLNSAAAGAVCPEYAKDLSKKWQKFVTQGKASGKTP
EQCRKMGNEIGAKILGNYNDILKACDALDYHDLISCSVTLLSDFPEVFKECQDTWKAIIV
DEFQDTSTMQYKLLRMLGSHNHITIVGDDDQSIFGFNGADSSGFDSFHRDFPNYKEVRLI
KNYRSSRHIVEAASSIIKNNTKRCQSKSISSENSQGSKITVKECHNEEAQCAYVIDKIFE
ITNDGSTPCCSHGDIAILYRRQVSGKVFQNAFRQRKIPFNVHGVAFYRKKVVQIILAMLK
TTYSECDDASYRRVFKALLPFEKEEKKRVIEHIEKISTSRKCSFISAASDIFSAKISGTF
KRSQLTQGRKVLQTLDMVAKLVDREQSLSAVVTCVANMIPQKYLLEQRAVVDNDGGKLLN
EDNDLRSVLQYLMDDVAEFISTHCTTTEEEVDAIKEKKGCNQLNSFINYISERETENFRS
RRHDNENSVTLTTIHQSKGLEWDIVFIVKANENEIPLLHESNGNASESGTSLEEERRLLY
VAMTRARKKLFFLYVTVDSNWQVLQPSRFLKEIPGHLLQGDMSVNDCRKVPENLPNKTEQ
SVSSFETDRKHEESKLTDNDVMNIPVDDTSEESIASYALNGNNFLKRFDVEVRSVVSHLF
HNWAKKQAFQEPKRLIDKVRFVIGERLAIKKNKHKDVLRALKSSLTSEEAFQYAEHVLRW
EQLPADTRAHIVREKQEHFQKLRIENSMGTSEATSKQIAFLHSLGCTVVPTSRLHASRLI
EQYKSL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggagaatctcccacccaacagaggaatgtggaatcaagagtacagtcatggtcggatt
tctcaaagcttcaggtccaccaagccgctccttgatcggaaaaggccattagagaacgca
cctaattcctccgatcagaggatgaaggaatcatcaatgggtactgaatcccttcctccc
catacaaacttcaatagaactcctcttatggagttatctacaaatacaccatacaaacgc
ctaaaaccggcgtttgagtcatatgctgatgattatccttgtggcttgaccacccctcct
cctaggtttgatctggacaaggagatcattaacggatttcagaccgagatttctggggac
agtggattttcatcagaagcatttgttactcccttgaaagagccagaaagagttacacta
agctacggttgctctacttcttcttcacttcttgatgatgacattgatgattccatttta
gaagagattgacttaatatatgaacaatcagcgagaaaagcagtatgtcaaactccaagt
accagcataaatcagactccgtccaaagataataagagcagtgacctcaaggccagctta
gattttagggatgtcaaaaagtttgagccagattctaatgtcaaagtgaagctcgatgaa
gagactaccattgctgctgatcctgcacttctcaattccatgcctgatgagtgttccaaa
tatatcatgtccttaaatgatagacagcgtgatgcagcttgtagtaatatttcaactcct
ttgatggttattgctggtcctggaagtggaaagacttccaccatggttggccgcgtctta
gtgctgctcaatgagggtctacttccatcgaatattcttgctatgactttcactacagca
gcaacttctgagatgcgagaacgcataggaaaatctgccggaaagaaagcagcgaaagac
ataacaatcagtacattccattcattttccttgcaactttgtcggatgcatgcagacaag
ttacaacgtacatctgagttctcagtgtatgggcatgggcaacaaagaagagcgataata
gaagcagtgcgtttatatgaggaggaaaagaagaatggaagcaaaacttctgttgcatgc
gagtctggagaagatctaaatagtgcagcagcaggagcagtatgtcctgaatatgccaag
gatctatcaaaaaaatggcagaaatttgtgacccagggaaaagcttccggtaaaactcca
gagcagtgccgtaagatgggcaatgagataggagctaaaattcttggaaactacaacgat
atcctaaaagcttgtgatgctctggactatcatgatttgatcagttgttcggtcacactc
ctctctgactttcctgaagtattcaaggaatgccaagatacctggaaagccatcatagtt
gatgaattccaagacactagcacaatgcagtacaagcttttacgaatgctaggctctcat
aatcacataactattgttggtgatgatgatcagtccatctttggttttaacggggcggac
agttcaggatttgattcatttcaccgagatttcccaaactacaaagaggtcaggcttata
aaaaactatcgctcctctcgccatattgtggaagctgcctcttctatcataaaaaacaat
acgaagcgttgccaatcaaaaagcatttcgtctgaaaactcccagggatctaagattact
gttaaggaatgccataatgaggaagcacagtgtgcatatgtcattgacaaaatatttgaa
atcactaatgatggctcaacaccttgttgttcccatggagatattgctattctctatagg
aggcaggtgtcaggtaaagtgttccaaaatgcattccgccagagaaaaataccatttaac
gttcatggtgttgctttctacagaaaaaaggttgtccaaatcattttggccatgctgaag
acaacatattccgaatgtgatgatgcttcttataggcgagtgttcaaggcattacttcct
tttgagaaagaggaaaagaaaagggttatagaacatattgaaaaaatctccactagtagg
aaatgcagcttcatatcagcggcgagtgatatcttcagtgccaagatttctggtaccttc
aagaggagccagcttacccagggacgcaaagttttgcaaactcttgacatggtagcaaag
ctggttgatagggaacaatcactttcagctgtagtaacatgtgtggcaaatatgatacca
cagaaataccttcttgagcaacgagcagttgtggataatgatggaggaaaactgcttaac
gaagacaacgatcttagatctgtactccagtacttaatggatgatgtagctgagtttatt
tctactcattgcactacaactgaagaagaagtggatgcaatcaaagaaaagaaaggctgc
aatcaacttaattcatttatcaactatatctcggagcgggaaactgaaaattttcgttca
agaagacatgacaatgaaaattctgtcactttgaccaccattcatcagtctaaaggtttg
gagtgggacatagttttcatagtcaaggctaatgaaaatgaaattcccctattacatgag
tctaacggcaatgcatcagagagtggaacatcacttgaggaggaacgtcgccttttgtat
gttgctatgactcgtgctcgcaagaaactattttttttgtatgtgacagtggattcaaac
tggcaggtgctccaaccctcacgatttcttaaagagattccaggccatcttctacaggga
gacatgagcgtaaatgattgcagaaaagttcctgaaaatcttccaaacaaaactgagcag
agcgtctccagttttgaaacagacagaaaacatgaggaaagtaaactaacggacaatgat
gtgatgaacattccagtagatgatacctccgaggagtcaatagcatcatatgcactcaat
gggaacaacttccttaagaggtttgatgtggaggttagatcagttgtctctcacttattt
cacaactgggctaagaaacaagcattccaggaaccaaagaggctgattgacaaggtaagg
tttgtgattggtgaacgtttggccatcaagaagaacaaacacaaggatgtcttacgagca
ctcaaatcatcattgacttccgaggaagcgttccaatatgcagaacatgtacttaggtgg
gaacaacttcctgcagacacacgggctcatatagtgcgcgagaaacaggaacatttccaa
aaactgagaattgaaaactcaatgggcacttcggaagcaacgagtaaacagatcgcattt
ctgcatagtctaggatgcacagtggtcccaacatcacgtctccatgcgtcacgtttgatt
gaacagtacaaatcactctga
DBGET
integrated database retrieval system
