Arabidopsis lyrata (lyrate rockcress): 110226342
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Entry
110226342 CDS
T01578
Name
(RefSeq) anaphase-promoting complex subunit 4 isoform X1
KO
K03351
anaphase-promoting complex subunit 4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110226342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
110226342
03036 Chromosome and associated proteins [BR:
aly03036
]
110226342
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
110226342
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
110226342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC4
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR19_1st
WD40
WD40_Prp19
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NUP159_NUP214
EIF3I
WDR90_beta-prop_4th
Beta-prop_HPS5
B-prop_COPA_B_2nd
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
110226342
NCBI-ProteinID:
XP_020873289
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MSEMASDEEENIIPFQLQFDKPIPFQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWT
ISPGKPVTSLCWRPDGKAIAVGLEDGTIALHDVENGKLLRSLKPHSVAVVCLNWEEDGQS
NTDESDNFSVYEDRTSRFFPPAPRAPKIPGLVAGDSSFMDDGEDSLAELSNTSFRKFNIL
CSGDRDGSICFSIFGIFQIGKINIHELFVSVPHLDEHASCKLFNASIYKVALSKDLCRLV
VMCTGELRDCAIKPREEKLNVEDLPGLHCLAMDTSIFWKRKYELHQVAQQASNIEDLTEV
IRASLSVMSKQWADAMKTFHDKFHSLSTLIIDNGLESSPQEEFLSLLGGARISPALNQFL
VNSLGEVGVKRVLKSVCGTGKELQQIVLDHLQPAAEIIGFRMGELRGLSRWRARYQGIGL
DEILLNEATENTGLLLVQVQRFMMVLSSVVQQFSNFFNWLVRSIKYLMQEPNDQLLSYNS
ELLVVFLKFLYDQDPVKDLLEPSEAGDDIEIDLKTIGRVKELLQFGGFSECDFLQRTLAK
EFQHMESSFKMALQMPFTTISRKISCMKWLPLCPLQLSTTETPPTIPMSLSFYKNELSDD
SPCQSGYTDYISFQVPNETFSEILNCIGIAKGFKQNSNNEKNGYTSLEAVLLSVPNGYTC
VDLSLYKDKELVLLLNKTSADSEGSGEACMMVVQTCDLPFISISRSSSLNQWEIEDLKGS
IVNLEIENEKVRKVPHSVIAPLAVSASRGVACVFAERRRALVYILEEDEDEEISDDK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaatggcgagtgacgaggaagaaaatatcattcctttccagctccagttcgac
aagcccataccttttcagattaagatagctgagtggaacccggagaaggatttactggca
atggttactgaggactcaaagattttgctgcatcgcttcaattggcagagattatggact
atttcgcctggaaagcctgttacttctttatgttggcgtcctgatggtaaagccatagct
gttgggcttgaggatggaaccattgcgcttcacgatgttgagaacgggaagctattaagg
agcttgaagcctcattctgtagctgtcgtgtgtcttaactgggaggaagatggacaatcc
aataccgatgaaagtgataatttctcagtttatgaggaccggacctcccgtttcttccct
cctgctccaagagctccgaagatacctggactggtagctggtgactccagtttcatggat
gacggtgaagactctttggcagaactatctaatacctcattccggaagtttaacattctt
tgcagtggtgatcgtgatgggagcatatgcttcagtatatttggaatatttcagataggg
aagattaacatacacgagctgtttgtttctgtgccccatctggatgagcatgcctcttgc
aaactatttaatgcttctatttacaaggttgctttgtcgaaagacctctgccgtctggta
gtaatgtgcacaggagagcttagggattgtgctataaagccaagagaggaaaaattaaat
gttgaagatctgcctggtttacattgccttgcaatggacacatctatattttggaagagg
aaatatgagcttcatcaggttgctcaacaagcttctaacattgaagatttgactgaggtt
attcgagcatccctgtcagttatgagcaaacaatgggcggatgcaatgaaaacttttcat
gacaagtttcattcgctttccacgttgatcattgataatggactggagtcatctcctcaa
gaagagtttcttagccttttgggtggtgcacggataagtccagcgcttaatcagttttta
gttaactctcttggtgaagtgggtgtgaagcgagttttaaagtcagtatgtggtacagga
aaagagcttcagcagattgtccttgaccatcttcagcctgcagcagaaattataggattc
aggatgggtgaattaagaggtctctcgaggtggcgtgcacgttaccaaggcattggtttg
gatgagatactccttaatgaagccactgaaaatactggtcttctacttgtacaagtgcaa
cggtttatgatggtactatcttctgttgtccaacagttttcaaatttcttcaactggctc
gtcagaagcataaagtatcttatgcaagaaccaaatgatcagcttttgtcatacaacagt
gaactccttgtggtattcttgaagttcttatatgatcaagatcctgtgaaagacctcttg
gagccatctgaagctggtgatgacattgaaattgatctcaaaaccataggaagagtcaaa
gagttacttcagtttggagggttttcagagtgtgactttctgcagaggacattggctaag
gaattccaacatatggagtctagcttcaagatggctcttcaaatgccctttacaacaata
tcaagaaagatatcatgtatgaagtggttgccgctttgccctcttcagttgtcaacaacg
gaaactcctcccacaattcccatgtctctttccttctataagaatgaactttctgatgat
tcaccttgtcaaagtgggtacactgattacatatcttttcaagtccccaatgaaaccttc
tcagagattttgaactgtattggcatagctaaaggttttaagcagaactccaacaatgag
aaaaatggttatacttctctggaagctgttttgttatctgtacctaatggctacacttgt
gttgatttgtctctctacaaggataaagaactggttttattattgaataagacaagtgca
gattccgaaggctcgggagaagcatgcatgatggttgtacaaacttgtgaccttccattc
atttccatttcaagatctagttctctaaaccagtgggagatagaggatttgaagggctcg
attgttaacctggaaattgaaaatgaaaaagttcgcaaagttccacattctgtcattgct
cctctagcagtaagcgcttcaagaggagtggcttgtgtttttgctgaaagaagacgagct
ctggtgtacatattggaagaagatgaagacgaagaaatctctgatgacaagtaa
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integrated database retrieval system
