Arabidopsis lyrata (lyrate rockcress): 110226622
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Entry
110226622 CDS
T01578
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00500
Starch and sucrose metabolism
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Module
aly_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
110226622
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
aly01003
]
110226622
Enzymes [BR:
aly01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
110226622
Glycosyltransferases [BR:
aly01003
]
Polysaccharide
Storage polysaccharide
110226622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Glyco_trans_4_4
TPR_MLP1_2
IFN-gamma
Motif
Other DBs
NCBI-GeneID:
110226622
NCBI-ProteinID:
XP_020874371
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MTTKLSSFCFLTHGLAGISCEREHGSSHRFFYLPSRRLASTSCKMRQQRGFDSSKRQEIK
KGSPKPILSINSGLQSNNDEESDLENGSADSVPSLKSDAEKDTIDMNHADENIEKKDDIQ
TIEVTRRKNKPAKKKEENVHATVDIGHDDGQNLNNLTVPEVAKALSLNKSEGEQISDGQF
GELMTIIRNAEKNILRLDQARATALDDLNKILSEKEALQGEINVLEMKLAETDDRIKPAA
QEKVHVELLEEQLEKLRHEMTSPIESDRYVLALSKELETLKMENLSLRNDIEMLKSELDS
VKNTGERVVVLEKECSGLETSVKDLESKLLASQEDVSKVSTLKTEVTDLWAKAENLQLLL
DRATKQAEQAVMVLQQNQDLRNKVDKIEESLKEANVYKESSEKIQHYNELMQHKVTLLEE
RLEKSDAEIFSYVQLYQESIKEFQETLESLKEESKKKSRDEPVDDMPWDYWSRLLLTVDG
WLLEKKIASNDADLLRDMVWKKDRRIHDTYLDVKDKNERDAISAFLKLVSSPTSSGLYVV
HIAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVES
YFDGKLYKNIIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSYFSRAALELLL
QSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTASASELGSCGL
DVNQLNRPDRMQDHSSGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTSEGGKGLHSTLNFH
SKKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKNALRKQLGLSSAESRRPLVG
CITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKSHDHVRLLL
KYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFDIDDDTI
PTQFQNGFTFQSADEQGFNYALERAFNHYKKDEEKWMRLVEKVMSIDFSWGSSATQYEEL
YTRSVSRARAVPNRM
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaagctatcgagcttctgtttcttgacccatggattagcgggaatttcttgc
gagagagaacacggaagttctcatcgttttttctatctcccttctcgtcgattagcttct
acttcttgtaagatgcgacaacaacggggtttcgactctagtaaaagacaagaaatcaag
aaaggatcccctaaaccgatcctatcgataaattcaggtcttcagagcaacaacgatgag
gaatctgatctggagaatggttctgcggatagtgttccgagcctcaagtcagatgcagaa
aaggataccatagatatgaatcatgctgatgagaatattgaaaagaaagatgatatacaa
acaattgaagtaactcggcgcaagaataaacctgcaaagaagaaggaggagaatgttcat
gccacagttgatattgggcatgatgatgggcagaatttaaataatttaactgtgcctgag
gttgcaaaagctttgtcgcttaacaaaagtgaaggtgagcagatttcagatggacagttt
ggggaactgatgacaattataagaaatgcagaaaaaaatattcttcggcttgatcaagca
cgggccactgctcttgacgaccttaacaagattctaagtgaaaaggaagctttgcaggga
gaaatcaatgtcttggagatgaaattggctgagactgatgataggattaaacctgctgct
caagagaaagtacatgtagagcttctggaagaacagttagagaagcttcgacatgaaatg
acctcccctatagaaagtgatcgttatgttctagctcttagcaaagagctcgaaacattg
aagatggagaatctctctttgagaaacgatatagaaatgcttaagtcagaacttgacagt
gttaaaaatactggtgaacgtgtggttgtgttggaaaaggagtgctcaggtttggaaact
tctgtaaaggatttggagtctaagttattggcttctcaggaagatgtctcgaaggtttct
actcttaaaaccgaagtcactgatctatgggcgaaggcagagaatctacagctgttgtta
gatagggctaccaaacaagcagagcaagcagttatggtgttacagcagaatcaagatctc
agaaataaggttgataaaatcgaggaatcacttaaagaggccaatgtttataaagaatct
tcagagaaaattcagcactacaatgagctaatgcaacataaggtgacattactcgaggaa
cggcttgaaaagtctgatgcagagatattctcatatgtccagttatatcaagaatcgata
aaagaattccaggaaacacttgaaagtttgaaggaagaaagcaagaaaaaatcaagagat
gaaccggttgatgatatgccttgggattattggagtcggttacttttaactgttgatgga
tggctgcttgaaaagaaaatagcaagcaacgatgctgacttactgagagacatggtatgg
aagaaagatagaagaattcatgatacttatcttgacgtcaaagataagaatgaacgtgat
gccatctctgcatttctcaagcttgtgtcatctccaacaagttcaggattgtatgtcgtt
cacattgcagctgagatggcacctgtagctaaggtgggaggtttgggagatgttgtggca
ggtcttggtaaggcattgcaaagaaaaggtcatctggtggagattattctccccaaatat
gactgtatgcagtatgaccgtgtccgtgacttaagggctttggatactgttgtggagtca
tattttgatgggaagttatataaaaacataatttggattggcactgttgaaggtttgcct
gtacatttcattgaacctcaacatccaagcaaattcttctggagaggacagttttatgga
gagcaagatgatttcagacgcttctcgtattttagccgagctgcattagagttgcttctt
cagtccggcaaaaaacccgacatcatacattgtcatgactggcaaacagcttttgttgca
ccactgtattgggatctgtatgctccaaagggattagattctgcaagaatatgctttaca
tgtcacaattttgagtatcaaggtaccgcgtctgcttcagaattgggatcttgtgggctt
gatgttaaccagttaaatagaccagacagaatgcaggatcactcgtctggagatagagtc
aaccctgttaagggtgctataattttctcaaatattgtaacaaccgtgtcccctacttat
gcacaagaagttcgaacatctgagggaggaaaaggactccattcaacactcaattttcac
tccaagaagttcattggaattcttaacggcattgacacggattcatggaatcctgccacc
gaccctttcctcaaggctcagttcaacgctaaagatctacaagggaaagaagaaaacaaa
aacgcccttagaaagcagcttggactttcttcagccgagtcaagacggccgctggttggt
tgcataacaagattagtaccacagaaaggagttcatctaatcagacatgccatatacaga
acattagagttaggtggacaatttgtacttcttggttctagcccggttccacatattcag
agggaatttgaaggtattgaacaacagtttaaaagccatgaccatgtccggttgttacta
aagtacgatgaagctctgtctcatacgatttacgcagcatctgatttgttcatcattcct
tcaatttttgagccttgtggacttacacagatgattgctatgcgatacggttccattcca
attgcgcgaaaaactggaggcttaaacgacagtgtcttcgacatcgatgatgatacaata
ccaacacagtttcaaaatggatttacatttcaatccgcggacgaacagggtttcaattat
gcattggagcgagcatttaatcactacaagaaagatgaagagaaatggatgagacttgta
gagaaagtgatgagtatagatttcagttggggatcatcggctacacagtacgaagaactc
tacacaagatcagtgtccagagccagagctgttcctaaccgcatgtga
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integrated database retrieval system
