KEGG   Arabidopsis lyrata (lyrate rockcress): 110227119
Entry
110227119         CDS       T01578                                 
Name
(RefSeq) RING-H2 finger protein ATL7
  KO
K19039  E3 ubiquitin-protein ligase ATL7/58/59 [EC:2.3.2.27]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    110227119
Enzymes [BR:aly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110227119
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    110227119
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-ANAPC11 zf_RING_Vps8 Zn_ribbon_IFT122_C zf-C3HC4_3 zinc_ribbon_16 FANCL_C Prok-RING_1 PHD_NSD SYNRG_C zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 110227119
NCBI-ProteinID: XP_020876080
LinkDB
Position
Unknown
AA seq 237 aa
MSYSDPNQNPIPETYAPSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTN
VDWSSLGMRGGIFVPTNNNLSTAELGLSKDLREMLPIVIYKESFTVKDSQCSVCLGDYLA
EEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPTLDGSHQSPEIVPPIENSNG
GGASAQLPDSQSTTEAVSHIEDIQEGNGDSQEVFKEPEENDRNSVGTSDGCCTCRLG
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcttacagtgacccaaaccaaaacccaattccagaaacttacgctccatcgaactca
actgaatccgagaaactgaaactttaccaagcttttatcttctctgttccaatctgtttc
acattcatcgtcctcttcgttctctacgtcatttaccttcgacgaaacagcaccaccaac
gtcgattggtcttctcttggaatgcgtggtggcatcttcgtgcccaccaacaacaatctc
tcaacggctgaattaggactgagcaaagatttgagagagatgcttcccattgttatctac
aaggagagtttcacagtcaaagattcacaatgttcagtgtgtcttggggactacctagca
gaagagaaactccaacaaatgccatcatgtgggcacacttttcacatggaatgtattgat
ctttggctcacatcacacacaacttgccctctttgtcgtctctctcttatccccaaaccg
accctagacgggtcccatcaaagtccagagatagtccctcccatagaaaactctaatgga
ggaggagcttcggctcaattaccagattcccaatcaacaaccgaagcagtaagtcacatc
gaggatatccaagaaggtaacggagatagtcaagaagtctttaaggaaccggaagagaat
gaccgaaacagcgtagggacttctgatggttgttgtacttgtagacttggttaa

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