Arabidopsis lyrata (lyrate rockcress): 110227152
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Entry
110227152 CDS
T01578
Name
(RefSeq) DNA repair protein RAD51 homolog 1
KO
K04482
DNA repair protein RAD51
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440
Homologous recombination
aly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110227152
03460 Fanconi anemia pathway
110227152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
110227152
04121 Ubiquitin system [BR:
aly04121
]
110227152
03400 DNA repair and recombination proteins [BR:
aly03400
]
110227152
Membrane trafficking [BR:
aly04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110227152
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110227152
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
110227152
RecA family proteins
110227152
FA (Fanconi anemia) pathway
Other FA pathway factors
110227152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
Motif
Other DBs
NCBI-GeneID:
110227152
NCBI-ProteinID:
XP_020876169
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MTTMEQRRNQNAVQQQDDEEIQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPR
KDLLQIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGI
ETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADR
FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATT
TRLALRKGRAEERICKVISSPCLPEAEARFQISTEGVTDCKD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaatggagcagcggagaaaccagaatgctgtccaacaacaagatgatgaagag
atccagcacggacctttccccgtcgaacagcttcaggccgcaggtattgcttctgttgat
gtaaagaagcttagggatgctggtctctgtactgttgaaggtgttgcttatactccaagg
aaggatctgttgcagattaagggaatcagtgatgccaaggttgacaaaattgtagaagca
gcttcaaagctagttcctctgggtttcactagtgctagccagctccatgcccagagacaa
gagattattcagattacctctggatcacgggagctcgataaagttctagaaggaggtatt
gaaactggatccatcactgagttatatggtgagttccgctctggaaagactcagttgtgc
catacactgtgtgtaacttgtcagcttcccatggatcaaggaggcggagagggaaaggcg
atgtacattgatgccgagggaacatttaggccacaaagactcttacagatagctgacagg
tttggactaaatggagctgatgtacttgaaaacgtcgcctatgcgagggcgtataatact
gatcatcagtcaaggcttttgcttgaagcagcatcaatgatgattgaaacaaggtttgct
ctcatgattgtcgatagtgctaccgctctctacaggacagatttctctggaagaggagag
ctttcagctcgacaaatgcatcttgcaaagttcttgagaagccttcagaagttagcagat
gagtttggtgtggctgttgttataacaaaccaagtagttgcgcaagtagatggttcagct
ctttttgctggtccccaatttaagccgattggtgggaatatcatggctcatgccaccaca
acaaggctggcgttgaggaaaggaagagcagaggagagaatctgtaaagtgataagctcg
ccatgcttgccagaagcggaagctcgatttcaaatatctacagaaggtgtaacagattgc
aaggattga
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