Arabidopsis lyrata (lyrate rockcress): 110227309
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Entry
110227309 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC110227309 isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00270
Cysteine and methionine metabolism
aly01100
Metabolic pathways
aly04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
110227309
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110227309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
110227309
03032 DNA replication proteins [BR:
aly03032
]
110227309
03036 Chromosome and associated proteins [BR:
aly03036
]
110227309
Enzymes [BR:
aly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
110227309
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
110227309
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
110227309
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110227309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWWP
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
110227309
NCBI-ProteinID:
XP_020876868
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MNEDAEIAQQTDSIQDPKVTQGDDTVVDSNGDGHEAIDNDDDVAASSPMELDSAVGNDDG
DVRVSESERSEKNGVVGSEEEDDISETKSEIKSEDVLIDKDDDSSEHNEEEEEDGSDDQS
SELGSEADEKNLDLKEEKIGVSDYKSLLSEFDDYVASEKMGSGVSRALSYGFEVGDLVWG
KVKSHPWWPGHIFNEAFASPSVRRMRRIDHVLVAFFGDSSYGWFDPAELIPFEPNLEEKS
QQTVSKHFVRAVEEAMDEASRRSALGLTCKCRNPYNFRPTNVEDYFAVDVPDYELQALYS
ADQIKNSRDKFLPVETLSFVKQLALAPQECDPDSLKFMKKKAVFFSFRKAVFEEFDETYA
QAFGTKSARSSVSSHESHNRAPPRAPLSGPLVIAETLGDLKSSKKPKKVKDSKKKDKYLL
KGRDKAGDKSVQFGQIEASSLTSHIQGIDGSLDGDFVLQRRAPMLQTPVKDEQSGIVGID
FASSSAAIPGKECSVPMLSLDEEKGLAEESKEKMEERSDVLPEHGKSEAMASRKEEAGTD
LGSAESSLQPLLESHTSASEGKSSTGSVIKKVKVSKRSSSEMGSEDPPSEPKKKKKKKKE
PDSDHAVKRKFLSSGEAGAKKLSQLGSMHLQSYMEVDVPQLLSHLQDLSLDPFHGSSVTS
FGAARKFFLRFRSLNYQKSLSVHSSDATVENARDTKPSKPVKTVKRTEDPSKAGKKRLSS
DRQDDIPSAKKLKKTNQLKSMTSEKKISREAKDSIKPVREQSSAVQAKAARAQTGKKTAP
SVKVVEPTMLVMKFPPGTSLPSAALLKARFGRFGLLDQSAIRVFWKSSTCRVVFLYKADA
QTAFRYATGNNTLFGNVNVKYFLRDVDAPKAEPREPENTKEDDEPQSQWLDQAPPLHQPT
LPPPNVNLKSCLKKPVDDPSSSSNNGNGNRATVRVKFMLGGEENSSKATTEPPPVTTISN
RNSGPSSSSSSSVAMEFVSKKFQNVVHHQQLPPSTLPPILPLPPQYTKPQQHPINPIDHV
EPPMPPSRNFRGPNPAVCAGDISHQMLNLLSKCNEVVANVTGLLGYVPYHPL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggatgctgagattgctcaacaaacggattcgattcaggatcctaaggtaact
caaggtgatgatactgttgttgattcgaacggggatggtcacgaagccattgataatgat
gatgatgttgcagcttcttcacctatggagctcgattcggctgttggaaatgacgatggc
gatgttagggtttctgagagtgagagatcggagaaaaatggtgtcgtagggagtgaggag
gaagatgatattagtgaaacgaaatctgagattaaaagcgaggatgttttaattgataag
gatgatgatagttctgagcataatgaagaagaagaagaagatggctccgatgatcaatct
agtgagcttggttctgaagctgatgagaagaatttggatttgaaggaagagaaaatagga
gtttcggattataaatctcttttatctgagtttgatgattatgttgcgagtgagaaaatg
ggttctggagtttcgagggcattgagttatgggtttgaagttggagatttggtttggggt
aaggtaaagtctcatccttggtggcctggtcatatatttaatgaagcttttgcgtctcct
tctgttcgtcgtatgaggaggattgatcatgttcttgttgcgtttttcggggatagtagt
tatggttggtttgatcctgctgagcttattcctttcgaacctaatttggaggagaaatca
cagcagactgtttcgaagcattttgttagagctgtggaggaagccatggatgaggcgagt
agaaggtcagctcttggtttgacttgtaaatgtcggaatccttataactttaggcctact
aatgtggaagattattttgctgttgatgtgcccgattacgagcttcaagccctttactct
gctgaccagattaagaattctagggataagtttttacccgttgaaaccctttcgtttgtg
aagcaattggcgttagcacctcaagagtgtgatccagacagtttaaagtttatgaagaag
aaagcagtgtttttttctttccgcaaggcagtgttcgaggagtttgatgaaacctatgca
caggcctttggaacaaaatctgcacgctcttcagtgagttcgcatgaatctcataataga
gcaccgcctcgagctcccttgagtggccccctggtcatagcagaaacgctaggtgacctg
aagagctctaaaaaacccaaaaaggttaaggactctaaaaaaaaggacaagtatcttctc
aaaggaagggataaagctggtgataagtctgttcaatttggccaaattgaagcaagttca
ttaacttctcatatccagggaattgatggatctttggacggggattttgtgctgcagaga
agagctccaatgcttcaaactccagtgaaagatgagcagtctgggattgttggcattgat
tttgcctcttcaagtgcagctattcctggtaaagaatgttcagttccaatgctctctctt
gatgaagaaaagggtttagccgaagaatcaaaggagaaaatggaagaaaggtctgatgta
cttccagagcatgggaaatctgaagctatggcgagtcgtaaagaagaggctggaacagat
cttggatcagctgaaagctctctccaacccctgcttgagtctcatacctcagcatctgag
gggaaaagttccacaggctctgtaatcaagaaagtcaaagtttctaaacgatcttcaagt
gaaatgggctcagaggatccaccttcggagccaaaaaagaaaaagaaaaagaagaaagag
cctgactctgaccatgcagtgaagagaaagtttttgtcttccggggaagctggggccaag
aaattgtcccagcttggttcaatgcatttacagtcgtatatggaagtcgatgtgccgcag
ctgttgagtcatctgcaagatctctctcttgaccctttccatggttcatcagttacttct
tttggagctgctaggaaattttttctccgtttccgttcacttaattaccagaaaagcttg
tctgtgcattcctctgatgctactgtcgaaaatgccagagacacaaaaccctcaaaacct
gtcaagactgtgaagagaactgaagacccatcaaaagctggaaaaaaacgtctctcttct
gatcgtcaagatgacatcccatcagctaagaagctgaagaaaactaatcagttgaaatca
atgacttctgagaagaagatcagccgagaagcaaaggatagtataaaaccagtaagagag
caaagcagtgcggtacaagcaaaagcagccagagctcaaaccgggaagaaaacggctcca
tcagttaaggtggttgagcccacaatgctggtcatgaaattcccacctggcacgtctctc
ccttcagctgcattactaaaggcgagatttggtcgcttcgggctgttagatcaatccgcc
attagagttttctggaaatcatcgacctgccgtgttgtgtttctgtacaaagccgatgca
cagactgcttttcgatatgcaacaggaaacaacactctatttggaaatgtgaacgtaaag
tactttctccgtgatgtggatgctcctaaagccgagcctcgtgaaccagaaaacacaaag
gaagatgatgaaccacagagtcagtggctagaccaagcaccaccacttcaccaaccaacc
ttaccaccaccaaacgtcaacctcaaatcctgcttgaagaaaccagttgatgacccgagc
agtagtagcaacaacggaaacggtaaccgcgcaactgtaagagtcaaattcatgttaggt
ggtgaagaaaactcgagtaaagcaaccaccgagccaccaccagtcacaacaatctcgaat
agaaacagtggaccttcttcatcatcatcatcatctgttgcaatggaatttgttagtaag
aagtttcaaaacgttgttcatcatcaacagcttcctccttctacattgcctccaattctt
cctctccctccacaatacacaaaaccacaacaacatcccattaacccaatagaccatgtc
gaaccaccgatgccaccttcaagaaacttccgtggcccgaacccagcggtttgcgctgga
gacatctctcaccagatgctcaaccttttgtcaaaatgcaacgaagtagtggctaatgtc
acgggcttattgggctacgtaccttaccatcccttgtaa
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integrated database retrieval system
