Arabidopsis lyrata (lyrate rockcress): 110227467
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Entry
110227467 CDS
T01578
Name
(RefSeq) AP-2 complex subunit alpha-1 isoform X1
KO
K11824
AP-2 complex subunit alpha
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110227467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
110227467
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
110227467
Membrane trafficking [BR:
aly04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
110227467
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110227467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Alpha_adaptin_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
110227467
NCBI-ProteinID:
XP_020877261
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MTGMRGLSVFISDIRNCQNKEAERLRVDKELGNIRTCFKNDKVLTPYKKKKYVWKMLYIH
MLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNEA
FQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVD
GWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQEY
TYYGIPSPWLQVKAMRALQYFPTIEDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAVL
FEALSLVMHLDAEKEMISQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQ
SQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAIL
AEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQVYMIVKINILFILFM
TFESCLQISLIRQPYAASKAREYLDKIAIHETMVKVSAYILGEYGHLLARQPGCSASELF
SILHEKLPTVSTPTIPILLSTYAKLLMHTQPPDPELQKKVWAVFKKYESCIDVEIQQRAV
EYFELSKKGPAFMDVLAEMPKFPERQSSLIKKAEYVEDTADQSAIKLRAQQQPSNALVLA
DPQPVNGAPPPLKVPILSGSTDPESVARSVSHPNGTLSNIDPQTPSPDLLSDLLGPLAIE
APPGAVSNEQHGPVGVEGAADEVDGSAIVPVEEQTNTVELLGNIAERFHALCLKDSGVLY
EDPHIQIGIKAEWRGHHGRLVLFMGNKNTSPLTSVQALILPPAHLKLDLSPVPDTIPPRA
QVQSPLEVMNIRPSRDVAVLDFSYKFGTNVVSAKLRIPATLNKFLQPLQLTSEEFFPQWR
ALSGPPLKLQEVVRGVRPLALPEMANLFNSFHVTICPGLDPNPNNLVASTTFYSESTGAI
LCLARIETDPADRTQLRMTVGSGDPTLTFELKEFIKEQLITIPMGSRALVPAAGSAPSPA
PPVAQPPSPAALADDPGAMLAGLL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaatgagaggtctctccgtatttatcagtgacattcgtaattgccagaacaag
gaagcggagagactacgagttgataaggagcttggaaacatacgtacctgcttcaagaat
gacaaggttttgacaccatataaaaagaagaaatatgtctggaaaatgctttatatacat
atgctaggctacgatgtggattttggccatatggaggcggtttctcttatatctgcgcca
aagtatcccgaaaagcaggttggctacattgttacatcttgcttgctcaatgagaaccat
gactttttgaagttggcaataaatacagtgcggaacgatattattggtcggaatgaggct
ttccaatgcctagcactgaccttggttggaaatatcggtggaagagattttgctgaatca
ttagcacctgatgttcaaaagctacttatttctagtagttgcagacctctcgtaaggaaa
aaagcagcactgtgcctactgcgcttattccgaaaaaatcctgatgctgtcaacgtggat
ggctgggcggatcgtatggcacaacttttggatgaacgagatcttggtgtcttgacgtct
tctacaagtcttcttgtagctctggtatctaataatcatgaggcgtactcaagttgtcta
cctaaatgtgtcaaaatattggaacgccttgctaggaatcaggacgttcctcaggagtac
acatactatggcattccatctccttggctccaggttaaggcaatgagggctcttcaatat
ttcccgaccattgaagatcccagtaccagaaaagctctctttgaggtccttcagcgaata
ttgatggggacagatgttgtgaaaaatgtgaataaaaacaatgcgtctcatgctgtgctg
tttgaagctctatccctggtcatgcatcttgatgctgagaaggaaatgatatcacagtgt
gttgctcttcttggcaagtttatttcggtccgtgagcccaacattagatatctaggcttg
gaaaatatgacgcggatgctgatggtcacagatgttcaagatatcataaagaagcatcag
tctcagataatcacctccttgaaagaccctgacatcagtattcgtaggcgtgctcttgat
ttattatatgggatgtgcgatgtgtcaaatgcaaaggatatagtcgaagagttgttgcag
tatcttagcacagcagagttttccatgcgggaggaattatcacttaaagctgctatcctt
gctgagaagtttgctcctgatctatcatggtatgtcgatgtgatccttcagttgatcgac
aaggctggggattttgttagtgatgacatttggtttcgtgtggttcagtttgttacaaat
aatgaagacctgcaggtttatatgattgttaagataaatatattgtttatcctatttatg
acattcgaaagttgcttacaaatttctttgatccgacagccttacgccgcgtcaaaagca
agagaatatttggacaaaatcgcaatacatgagactatggtgaaggtcagtgcttatatt
ttgggggagtatggtcaccttctagctagacaacctggatgcagtgcaagtgaactcttt
agcatcttacatgagaagcttcccacagtatcgactcccaccattcctattcttctttcg
acatatgcaaagcttcttatgcacactcaacccccagatccagaactgcaaaaaaaagtt
tgggctgtatttaagaaatatgagagttgtattgatgtggagatacaacagagggcagtt
gaatattttgaattgagtaaaaaagggcctgcctttatggatgtattggctgagatgcca
aaatttccggagcgccagtcttcattgataaaaaaggcagaatatgttgaagataccgca
gaccagagtgccatcaagcttagagcacaacaacagccttcaaatgctttggttttggct
gacccacagcctgttaatggggcaccaccacctttgaaggttccaattttaagtggaagc
acggaccccgagtcagtggctcgatctgtctcacatcccaatggaactttaagtaatata
gatccacaaactccatcacctgatctgcttagtgacctgctcggtcctcttgcgatagag
gctccacctggagctgtctcaaatgaacaacatggtcccgtaggggtagaaggagctgca
gatgaagttgatggttccgccattgtacctgttgaagagcaaacaaatacagtggagctg
ctcggaaatattgcggagagatttcatgctttatgtttgaaagacagtggtgtcttatac
gaggatcctcatatccagattggcatcaaagctgaatggagaggacaccatgggagactt
gttctcttcatgggaaacaagaatacttctccacttacatcagttcaagctctgatacta
ccccctgcccatttaaaactggatctgtctccagtacctgatacaattcctcctcgagca
caggtacaatctccacttgaagtgatgaacatccgccctagtagggatgttgcagttttg
gatttctcctacaagtttggtacaaacgtggtcagtgccaaattacggatcccggcaact
ttgaataagtttcttcaaccgctacaattgacatctgaagagttcttccctcaatggaga
gcactttcagggccacccttgaaacttcaggaagttgttagaggtgtaagacctctagct
cttccggaaatggcaaatctgttcaacagtttccatgtgacgatatgccctgggcttgat
ccaaaccctaataatctagtggcaagcacaaccttctactctgaaagtacaggagccata
ctctgtttggcaagaattgaaacagacccagcggacagaacccaattgcgaatgacagta
ggctcgggagatcctacccttacatttgagttaaaagaattcatcaaggaacaactaatt
actatcccaatgggatctcgagctctagttccagcagcaggttcagcaccatcaccagca
ccacctgtagctcaaccgcctagcccagcagctttagctgatgatccaggagctatgctt
gctggcttactttaa
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integrated database retrieval system
