Arabidopsis lyrata (lyrate rockcress): 110227523
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Entry
110227523 CDS
T01578
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
110227523
Membrane trafficking [BR:
aly04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
110227523
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
ArsR
Motif
Other DBs
NCBI-GeneID:
110227523
NCBI-ProteinID:
XP_020877582
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MIRRPIYDCSAAARHLISPLSTFSRFLSEHKAGEPKASALVSNPSPKSPIGSPTRVQKLI
ASQSDPLLAKEIFDYASQQPNFRHSQSSYLILILKLGRARYFNLIDDVLAKHRSSGYPLT
GEIFTYLIKVYAEAKIPEKVLRTFYKMLEFNFTPQPKHLNRILEVLVSHRGYLQKAFELF
KSSRLHGVMPNTRSYNILMQAFCLNDDLSIAYQLFGKMLERDVVPDVESYKILIKGFCRK
GQVNGAMELLEDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY
NTIILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLQEMIS
KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGEILHSDTWEMIIPLICKEDESEK
IKRFLEDAVKEEITGDTRIVDVGIGLGSYLSSKLQMKRKNVRERRRHL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgattcgccggccgatctacgactgctccgccgctgctcgccacctaatttctccgtta
tcgacattttcgcgttttctatctgaacacaaagctggagaaccgaaggcctcggctttg
gtatcgaatcctagccctaaatccccaatcgggtctccgactcgggttcaaaagctcata
gcttcgcaatcggatcctctcctcgccaaagagattttcgattacgcttctcaacagccc
aatttccgccattctcaatcttcttatctcatcctcattctcaaactcggccgtgctaga
tatttcaatctcatcgacgacgttctcgccaagcacagatcaagtggttatccgttaacc
ggagaaattttcacatatctgatcaaagtctacgcagaggcaaagataccggagaaagtt
ttaagaacgttttacaaaatgctggagttcaatttcacgccgcagccaaaacatctgaat
cggattctagaggttcttgtaagccatagaggttatctccagaaagcttttgagcttttc
aagagttcacggcttcacggagtaatgcctaacacgagaagctacaatatattgatgcaa
gctttttgtttgaatgatgatttgagtattgcataccaattgtttggtaaaatgcttgag
agagatgttgtccctgatgtggagtcttataagattctgataaaagggttttgtaggaaa
gggcaagtgaatggtgctatggaattactggaagatatgttgaataaaggatttgttccc
gatagactgagttatacgacattgttgaacagtttgtgtaggaagacgcagctcagagag
gcttataagcttttatgtaggatgaagttaaaaggttgtaatcctgatcttgttcattac
aacacgataattctcgggttttgtagagaagatcgcgcgatggatgctaggaaagttctt
gatgatatgttgtctaacggttgctcgcctaattcggtctcgtataggacattgattgga
ggattgtgtgatcaaggaatgtttgatgaagggaagaagtatctacaagagatgatatcg
aaggggttttctcctcatttctcggtttcgaattgtttggtaaaagggttttgcagcttc
gggaaagttgaagaagcgtgtgatgtggtagaggttgtgatgaagaacggagaaatattg
cattcagacacttgggagatgataattccattgatctgtaaagaagatgagtcggagaag
atcaaacggtttcttgaagatgctgtaaaggaagagataaccggtgataccagaattgtc
gatgtcggtatcggtttaggttcttacctttctagtaagctacagatgaaacgtaaaaat
gttagagagaggaggagacatttatag
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