Arabidopsis lyrata (lyrate rockcress): 110227525
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Entry
110227525 CDS
T01578
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110227525
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
110227525
NCBI-ProteinID:
XP_020877585
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MLPKFDPTDQKACLSLLEDLTTNVKQIQDSILEAILSRNARTEYLSGFLNGQVDKQSFKN
NVPVVTYEDIRPYIDRIANGEPSDLICDRPISVLLTSSGTSGGVPKLIPLTTEDLEQRMS
FSSLYAPLLNKHIDGLSEGKSLIFYFVTRESKTANGLMVRTMVTSFLKSIKPTSSFLWDR
LQISPHAITTCADTTQSMYCQLLCGLLERDNVARLGAPFASSFLKVIKFLEDHWPELCSN
IRTGRLSDWITDAQCTLGIGKFLTAPNPELASLIEQECSKKSWEAVLRRLWPKAKCIETI
ITGTMAQYIPLLEFYSGGLPLTSSFYGSSECFMGVNFNPLCKPCDVSYTIIPCMGYFEFL
EVEKDHQEAGHDPTAKTVVVDLVDVKIGHDYEPVVTTFSGLYRYRVGDVLRATGFYNNAP
HFRFLGRQKVVLSIDMDKTYEEDLLKAVTNAKRLLEPHDLMLMDFTSRVDSSSFPGHYVL
YWELGSKVKDSKLEPNSDVMEECCFTVEESLDAVYRKGRKNDKNIGPLEIKVVKPGAFDK
LMNFFLSRGSSVSQYKTPRSVTIEEAWKILEANVESEFLSRKIPSWELHELHSGR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaaagttcgatccaacagaccaaaaagcttgtctgtctcttcttgaggatttg
accaccaacgtaaagcagattcaagattccatattggaagcaatactttcacgtaatgct
cgtacggagtatcttagtggtttcctcaacggtcaagtcgataagcagagcttcaagaac
aacgtacctgttgtgacctacgaagatattaggccttatatcgatcgtatcgctaatgga
gagccgtctgatctaatctgtgatcgacctatcagtgtactcttgaccagttcgggtact
tcaggaggagttccaaagttaattcctttgacgacagaggatttggaacagaggatgtcg
ttttcttctctctatgcacctctactcaacaagcacatcgatgggcttagcgaaggaaaa
tctctcatattttattttgtgacgcgagaaagcaagactgccaatgggttgatggtcagg
actatggtaactagttttttgaaaagcattaaaccaaccagttcatttctttgggatcga
ttacagataagcccgcacgcgattacgacttgtgcagacactactcagagcatgtactgc
caattgctttgtgggcttcttgaaagagataatgttgctcgccttggtgcaccctttgct
tcatcctttctcaaagtaatcaagttcttggaagatcattggcctgagttatgctctaac
ataaggactggccgtctcagcgactggatcacagacgcgcaatgtactttggggattggt
aagttcctcactgctccaaatccggaactagcgagcctgatcgagcaagaatgtagtaaa
aaatcatgggaggcagtattgaggagactatggccaaaagcaaaatgcatcgaaaccatc
attacaggcaccatggcacagtacattccattgctggaattctatagcggtggtcttcct
ttgacttcatcgttttacggcagctctgaatgttttatgggtgtcaactttaatcctctg
tgtaagccttgtgatgtgtcgtacaccatcattccatgtatggggtacttcgagttctta
gaggtcgagaaagaccatcaagaagctggtcatgatcccacagcgaaaactgtggttgtc
gatcttgtggatgttaaaatcggccatgattatgaacctgttgtcacaaccttttctggt
ctgtataggtaccgtgtgggggacgttttaagagcgactggtttctacaacaatgcgcca
catttccgtttcttgggaagacagaaagttgttctgagcatcgacatggacaagacctac
gaagaagacctcctcaaggcagtgacaaacgcaaagcgcctgctggagccacatgacctg
atgctcatggatttcactagccgtgtagattcgtcctcgtttccaggacactatgtactc
tattgggaactcgggagcaaagtcaaggactcaaagctcgagcctaacagcgatgtcatg
gaagaatgctgcttcactgttgaggagtctctcgacgctgtgtacagaaaaggacgaaag
aatgataagaacattggaccacttgagattaaggttgttaagcctggcgctttcgacaag
ctcatgaacttctttctgtctcgaggctcttctgtgagtcagtacaagacaccgaggtcg
gtgacgattgaagaagcctggaagatattggaggccaacgttgaatccgagtttcttagc
cggaaaattccgtcgtgggagttacatgagcttcactccggtcggtaa
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