Arabidopsis lyrata (lyrate rockcress): 110227625
Help
Entry
110227625 CDS
T01578
Name
(RefSeq) telomerase reverse transcriptase isoform X1
KO
K11126
telomerase reverse transcriptase [EC:
2.7.7.49
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
110227625
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
110227625
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
110227625
Telomerase complex (fungi)
110227625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Telomerase_RBD
TERT_C
RVT_1
TEN_TERT
Motif
Other DBs
NCBI-GeneID:
110227625
NCBI-ProteinID:
XP_020878109
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MPRKPRRSVPEILWRLFGNRARNLNDAIVDLIPNRNIQLEKCRCRGQGCLGCSSDKSAFL
LRSDDPIHYRKLLHRCFVVLQEQTPPLLDFSPTFWWSQKEIVERIIEMMQSGCDCQNVIC
ARFDKYDQSSPTLELLTSSSWEFLLNRVGHDVMVYLLQQTSIFLPLLGKRHQQVSGPPLC
IKKKETLSVHENKRKRDDNVQPSKKRQRLSSAVNDCPKDDSAAVTPIVGEDAGQHREKKT
TKRSRLYLKRRRKQRKVNFQIVDYDAPCITPCTNGIASTGNEADERNLHIGLIGSLTDFV
KKAEQVKRNKNFKFGSSETYSVIPPNHILKTLRSNCSDSKLLMDHIFGEVNAWSTTPSHG
KGNCPDGSICLYHSLLKSLKSLIGKTKSSHLKTLLDKHCPVLLLQEDALKSENATSQSSD
KLPHGSSSQKGIPKCPSVEEMKLYCTKDQVVSFIWAICRYIVPESLLGTTHQMRVLRKNI
AWFVSRRRNEKCTVNQFLHKVKPSDFPFFARKQLCCMANGHELQNESIRSTQQMLCTKWI
SWLFLEIVKKLVHFNFYATESQGGRLNIYYYRKSSWERLVSKEISKTLDGYVQVDNTEAE
SKKLSNFRILPKANGVRLVLDFSSSSRSQSLRDTHAVLKDIQLKEPDVLGSSVFDHDDFY
RNLCPYLIHLRSQSGELPPLFFVVADVFKAFDSIDQSKLLHVIQSFLKDEYILNRCRLVC
CGKRSNWVNNILVSSDKNASFSRFTSTVPYNALQSIMVDQGKNHLVRKKDLMLWIGNMLK
NNMLQLDKSFYVQIAGIPQGHRLSSLLCCFYYGHLERTLIYPFIEEASKDVSAKECNREK
VLIAPTSYKLLRFIDDYLFVSTSRDQATSFYHRLKHGFKDYNCFMNQKKFCINFEDEEES
RCASNRMFVGDNGVPFVRWTGLLINSRTFEVQVDYTRYLSGHISSTFSVAWQNKPVRNLR
QKLCYFLVPKCHPVLFDSNINSGEIVRLNIYQIFLLAAMKFHCYVYEVSRFWKIHPQTLF
KFITLSTRYMFRLINRRVRRINTGSSFRPVLKLCKEEVIWLGLHAYIQVLKKKNSRYRTL
LIYLKSALSKQYLSRHLSPALEYAIDRPNSSSLWKLNY
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtaaacctagacgtagtgtgccggagattctatggaggttattcggaaacaga
gccaggaatttaaacgacgcaatcgtagatctgattcctaaccggaatatccagctggag
aaatgccggtgccggggacaaggttgtctcggttgcagcagcgataaatcggcgtttctt
ttgcgttccgatgatcctattcactaccgtaaacttcttcacagatgcttcgttgtactt
caagaacaaacccctccgcttctggatttctcgccaacattttggtggtcacagaaagag
attgtggaaaggattattgagatgatgcaatctggatgtgattgccaaaatgtgatatgt
gcaagatttgataagtatgatcagtcgagccctactttggagttattgacaagttcatct
tgggagtttcttctcaaccgggtcggtcatgatgtcatggtttatcttctacagcaaaca
tcaatattcttaccattactagggaaaagacaccagcaagtgtctggacctcctctatgt
atcaagaaaaaggagacattgtcagtccatgaaaacaaaagaaagagggatgacaacgtt
cagccatcaaagaaaaggcagcggctctcttctgctgtcaatgactgtcctaaggatgac
tctgcagctgttacgcccatagttggcgaggatgcaggccaacatagagagaaaaaaact
actaagcgttcaagactgtatcttaagcgtcggcgaaagcagagaaaggtcaattttcaa
atagttgactatgatgccccttgtataactccttgtacaaatggtatagcctcaactggt
aatgaagctgacgaaaggaatctgcacattggtttaattggaagtctcactgattttgta
aagaaggctgaacaggttaaaagaaacaagaatttcaagtttggcagctcggaaacgtat
tcagttataccaccaaaccacattttaaaaaccttgaggtccaactgttctgattcaaag
ctcctaatggaccatatatttggtgaagtaaatgcttggtcaacgacgccatctcatggc
aaaggcaactgtcctgatggatctatttgcttataccattcattgctcaagtctcttaaa
agtctcataggaaaaacaaagtcctcacatttgaaaacgctactagacaaacactgtcct
gttctcttgctgcaagaggatgcattgaagtccgaaaatgcgacttctcagagttcagat
aagctgcctcatggatcaagttcacaaaagggaatacccaaatgtcccagtgttgaagaa
atgaagctgtattgcacgaaagaccaagtagtgtcctttatttgggccatctgtaggtac
attgttccagaaagtttgcttgggaccactcatcagatgagggtacttaggaaaaacata
gcctggtttgtttcaaggcgacgaaatgagaaatgcacagtgaatcaatttttgcataaa
gtgaaaccatcagatttcccattctttgccagaaaacagttatgctgtatggccaacgga
catgaactccaaaatgagtccatcagaagtacacagcagatgttgtgcacaaaatggatc
tcttggcttttcttagagattgtcaagaaattggtgcacttcaacttctatgccactgaa
agccaaggagggcggctaaatatttattattaccggaaaagcagctgggaaaggttagta
agcaaagaaattagcaaaacccttgatggatatgtccaagtggacaatactgaagctgaa
agtaaaaagttatcgaattttagaattttaccaaaggccaatggagtgaggttggtgtta
gattttagttcttcgtcaaggtcgcaatctcttcgtgatacacatgctgttttgaaggac
atccagctcaaagaaccagatgttcttggatcttctgtttttgaccatgatgatttctac
agaaacctatgcccatatctgatccatttaagaagtcaatctggagaacttcctcctttg
ttctttgtggttgcggatgtattcaaagcatttgattcaattgaccagagtaagctactt
catgtcattcaaagtttcctgaaagatgaatacatcttaaacagatgtaggttggtctgc
tgtgggaagagatccaattgggtaaacaatatactagtctcgagtgataaaaatgctagc
ttttcaagattcacatcaactgttccatataatgcactgcaaagtatcatggttgatcag
ggaaaaaaccatctagtgaggaaaaaggatctcatgctttggataggaaatatgctaaag
aacaacatgctgcagttggataaaagcttctatgtacaaatagctggaatacctcaggga
cacagattatcatccttgttatgttgtttttactacgggcatcttgagaggactttgatc
tacccgttcatcgaagaagcctctaaagatgtgtctgctaaagaatgcaatagagagaaa
gtgcttatcgctcccacgagctataagttactgagatttattgatgactacctgtttgtg
tctacctcgagagatcaggcgactagcttctatcacaggttgaagcatggatttaaagat
tacaactgcttcatgaaccaaaaaaagttctgcataaattttgaagatgaagaagaatct
aggtgtgcttctaacagaatgtttgtgggtgataatggagttccttttgtcagatggacg
ggtttgcttattaattcccggacatttgaagttcaagttgactacacaaggtacttgagt
ggccatataagctcaaccttttctgtagcttggcagaacaaaccagttagaaatcttcgg
caaaaattgtgttacttcttggttccgaaatgtcacccagttctatttgactcgaacatc
aactcgggagaaattgtcaggttaaacatctatcagatctttctgttagctgcaatgaag
tttcactgttatgtctacgaggtgtcccggttttggaagattcatcctcaaacgttattc
aaattcatcacattatctacaaggtacatgttcagactcatcaatcgaagggtgcgcaga
atcaacactggttctagtttcagaccagttcttaaactatgcaaagaagaagtgatatgg
cttggcttacacgcttatattcaagttctgaagaagaaaaactcgcgatatcgaaccctc
ttgatctatttaaaatctgcactttctaaacagtatctttctcggcatctatcgcccgca
ttggagtatgcaatagaccggccaaactcttcttctctgtggaagttgaattattga
DBGET
integrated database retrieval system
