Arabidopsis lyrata (lyrate rockcress): 110227741
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Entry
110227741 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF645
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
110227741
04131 Membrane trafficking [BR:
aly04131
]
110227741
04121 Ubiquitin system [BR:
aly04121
]
110227741
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110227741
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
110227741
Membrane trafficking [BR:
aly04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110227741
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110227741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf_Hakai
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110227741
NCBI-ProteinID:
XP_020878836
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MLQIRLRRDSPTETGNGARPSPTETVTVACPDHLVLADLPVAKGIGSVTPTTVIKPVGRR
SRRQLGERVHFCVRCDFPIAIYGRLIPCDHAFCLECARSESICYLCDERIQKIQTIKMME
GIFICAAPHCLRSFLKKLDFEAHVHELHGSLLQADADKEDGNQSDVQSTMQQSSASESTL
RGPLRSQQQQSREQPLLNRSASFAKSQSGFGQVQNYPPDSDNSRPPGFETASPKPGIRFP
DYPQPMNLMQPPSLPVTMNQNPGLPQQFGFPSYPTTESGSSQQFFNGAQYEMTRTESGGS
EQGSLLGYPPPSPMMNLNFQGSYPPPSWNPGMAPPQTTQQVNRGRDGQSFGWQQENRDGF
GQE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaattcggcttcggagagattcgcctacggagactggaaatggagcgaggcct
tctccgacggagacagttactgtagcctgtcccgaccatctcgtcctcgccgatcttcct
gtcgcgaaagggatcggttccgtgactcccaccaccgtaatcaagcccgttggtcgtcgt
tctcgccgtcaactaggcgagagagttcatttctgcgtccgttgcgattttccgattgca
atctatggtcgtctgattccttgtgatcatgccttttgtcttgaatgtgctcgtagtgag
tccatctgctatttatgtgatgaacggattcagaaaattcagacaatcaagatgatggaa
ggaatcttcatctgtgcagctcctcattgtcttaggtcattcctgaagaaacttgacttt
gaagcccatgtccatgagctccacggaagcctattacaagccgatgcagacaaagaagat
ggtaaccagtcagatgttcagagcacaatgcagcaatcttcagcttcagaatccacgttg
cgaggtcctttaagatcccagcagcaacaatcccgtgaacaaccgttactaaacaggtcg
gcgtcatttgcaaagtcacaatctggatttggtcaagtccagaattaccctccagatagc
gataactctcgccctccgggatttgaaaccgctagtcctaaaccaggaatccggttccca
gactacccgcagcctatgaatcttatgcaaccacccagcttgcccgttacaatgaatcaa
aacccggggttaccacagcagtttggttttccttcgtatccaacaacagagagtggatca
tctcaacaattctttaacggtgctcagtacgagatgacaagaacagagagtggcggatca
gaacaaggttcattgctcgggtatccgccgccttcaccaatgatgaatctgaatttccaa
ggatcgtatcctcctccgtcatggaatcccggaatggcaccgcctcaaacgacccagcag
gttaaccggggtagagacggtcaaagttttgggtggcaacaagagaaccgtgatggcttt
gggcaggagtaa
DBGET
integrated database retrieval system
