Arabidopsis lyrata (lyrate rockcress): 110227821
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Entry
110227821 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase KEG isoform X1
KO
K16279
E3 ubiquitin-protein ligase KEG [EC:
2.7.11.1
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aly01001
]
110227821
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
110227821
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110227821
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110227821
Protein kinases [BR:
aly01001
]
Serine/threonine kinases: TKL group
RIPK family [OT]
110227821
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110227821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_15
Ank_2
Ank
Ank_4
Pkinase
PK_Tyr_Ser-Thr
Ank_5
Ank_3
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Tmemb_55A
Ank_KRIT1
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_4
zf-rbx1
zf_RING-like
Motif
Other DBs
NCBI-GeneID:
110227821
NCBI-ProteinID:
XP_020879194
LinkDB
All DBs
Position
Unknown
AA seq
1625 aa
AA seq
DB search
MVGRVKVPCCSVCHTRYNEDERVPLLLQCGHGFCKDCLSKMFSTSSDTTLTCPRCRHVSV
VGNSVQGLRKNYAMLALIHAASGGANFDCDYTDDEDEDDEDDGSEDDGARAARGFHASSS
INSLCGPVIEVGAHPEMKLVRQIGEESSGGFGGVEMWDATVAGGGGRCKHRVAVKKMTLT
EEMDVEWMQGQLESLRRASMWCRNVCTFHGVVKMEGSLCLLMDRCFGSVQSEMQRNEGRL
TLEQILRYGADVARGVAELHAAGVICMNIKPSNLLLDASGNAVVSDYGLAPILKKPTCQK
TRPEFDSSKITPYTDCVTLSPHYTAPEAWGPVKKLFWEDASGVSPESDAWSFGCTLVEMC
TGSTPWDGLSREEIFQAVVKARKVPPQYERIVGVGIPRELWKMIGECLQFKPSKRPTFNA
MLATFLRHLQEIPRSPSASPDNGIAKICEVNIVEAPRATNRGVFQDNNPNNLHRVVLEGD
FEGVRNILAKAAAGGGGSSVRSLLEAQNADGQSALHLACRRGSAELVEAILEYGEANVDI
VDKDGDPPLVFALAAGSPQCVHVLIKKGANVRSRLREGSGPSVAHVCSYHGQPDCMRELL
VAGADPNAVDDEGETVLHRAIAKKYTDCAIVILENGGSRSMAVSNAKCLTPLHMCVATWN
VAVIKRWVEVSSPGEISQAINIPSSVGTALCMAASIRKDHEKEGRELVQLLLAAGADPTA
QDAQHGRTALHTAAMANNVELVRVILDAGVNANIRNVHNTIPLHMALARGANSCVSLLLE
SGSDCNIQDDEGDNAFHIAADAAKMIRENLDWLIVMLRSPDAAMDVRNHSGKTVRDFLEA
LPREWISEDLMEALLKRGVHLSPTIYEVGDWVKFKRGITTPLHGWQGAKPKSVGFVQTIL
EKEDMIIAFCSGEARVLANEVVKLIPLDRGQHVRLRADVKEPRFGWRGQSRDSVGTVLCV
DEDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRQNLTSAKHGFGSVVPGSMGIV
YCVRPDSSLLVELSYLPNPWHCEPEEVEPVAPFRIGDRVCVKRSVAEPRYAWGGETHHSV
GKISEIENDGLLIIEIPNRPIPWQADPSDMEKIDDFKVGDWVRVKASVSSPKYGWEDITR
NSIGVMHSLDEDGDVGIAFCFRSKPFSCSVTDVEKVTPFHVGQEIHMTPSITQPRLGWSN
ETPATIGKIMRIDMDGTLSAQVTGKQTLWRVSPGDAELLSGFEVGDWVRSKPSLGNRPSY
DWSNVGRESIAVVHSIQETGYLELACCFRKGRWSTHYTDLEKIPALKVGQFVHFQKGLTE
PRWGWRAAKPDSRGIITTVHADGEVRVAFFGLPGLWRGDPADLEVEPMFEVGEWVRLREG
VSSWKFVGPGSVGVVHGVGYEGDEWDGTTSVSFCGEQERWAGPTSHLEKAKKLVVGQKTR
VKLAVKQPRFGWSGHSHGSVGTIAAIDADGKLRIYTPAGSKTWMLDPSEVETIEEEELKI
GDWVRVKASITTPTYQWGEVNPSSIGVVHRMEDGDLWVSFCFLDRLWLCKAGELERLRPF
RIGDRVKIKDGLVTPRWGWGMETHASKGHVVGVDANGKLRIKFLWREGRPWIGDPADIVL
DETSG
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggttgggagagttaaggtcccttgttgttccgtgtgccacacgcggtataatgaagat
gagagagttcctctattgcttcaatgcggccatggcttctgcaaagattgcctttcgaag
atgttctctacttcttccgacacaaccctcacttgtccccgctgtcgccacgtgtctgtt
gttgggaactctgtccagggtctgagaaagaactacgctatgcttgctctcattcacgcc
gcatccggcggcgctaacttcgattgcgattacacggacgatgaggatgaagacgacgaa
gatgatggtagcgaggatgatggagctcgtgccgcccgcggatttcatgcctccagctcg
attaatagcttgtgtggtccagtgatcgaggtcggagctcacccggagatgaagctggtg
aggcagattggggaagagagcagtggtggtttcggaggtgtggagatgtgggatgccact
gttgcaggcggtggtggacggtgtaagcaccgtgtggcggtgaagaagatgactttgacg
gaggaaatggatgttgagtggatgcaaggacagcttgagagcttgcggagggcatcgatg
tggtgtaggaatgtttgtactttccatggggttgtgaagatggagggatctctttgtctt
ttgatggacaggtgctttgggtctgttcagtctgagatgcaacgcaatgaaggcaggctt
actttggagcagattctaagatatggggctgatgttgctcgaggggttgcagaactccat
gcagcaggtgttatatgtatgaatataaaaccttccaatcttcttttggatgcaagtggt
aatgctgtggtttctgattatgggctcgctcccatcctaaagaagccaacatgtcagaaa
actcgaccagagtttgattcctcaaaaatcactccatacacggactgtgtaacactcagt
ccacactacactgcgccagaggcttggggaccggtgaaaaaacttttttgggaggatgca
agtggtgtatctcccgaatcggatgcatggagttttggctgtacgttagtagagatgtgc
actggatccactccgtgggacggtcttagtagagaagaaatttttcaagctgttgtgaaa
gcccgaaaagtaccaccacagtatgaacgcatagtgggtgtgggaattcctcgggaatta
tggaaaatgattggtgaatgtcttcagtttaaaccgtcgaaaagaccaacctttaatgca
atgcttgctacgtttcttcgtcatctacaagagataccacgtagcccttcagcaagccct
gataatgggattgccaaaatatgtgaagtaaacattgttgaagcacctcgcgcgactaac
agaggggtctttcaggataacaaccctaacaacctacatcgggttgttttggagggagac
tttgagggtgtaagaaatatactagcaaaggctgcagctggaggtggtggaagctctgtg
cgatctctattagaggcgcaaaacgctgatggtcaatcggctcttcacttagcttgcaga
cgcggcagtgctgaacttgtggaggctatactggagtatggggaggctaatgttgatatt
gtggacaaagatggggatcctcctcttgtctttgctttagcagctggatctccacaatgt
gttcacgttctcataaaaaagggggctaacgttaggtccagactgcgggaaggatctggc
ccatctgtagctcatgtgtgttcataccatggccaacctgattgtatgcgtgaattgctg
gtagctggagctgatccaaatgcagtagatgatgaaggtgaaactgtgcttcatcgagct
attgccaagaaatacacagattgtgccattgttatattggaaaatgggggctctagatca
atggctgtttcaaatgcaaagtgcctgacaccgttacatatgtgtgtagcaacatggaat
gttgctgttatcaagagatgggtggaagtttccagtccaggagaaatttctcaggcaatt
aatatcccaagttcagttggcactgctctgtgtatggctgcttctatacggaaagatcat
gaaaaggaaggtagagagctggttcagttattgcttgcagctggggcagatccaactgcg
caagatgctcagcatgggcgaacagcgttgcatactgctgctatggctaacaatgtggaa
cttgtgagagtcattctagatgctggtgtgaatgcgaacattcgcaatgttcacaataca
attcctcttcatatggctttggccagaggcgcgaactcctgtgttagcctacttctggag
tctggttcagactgcaatatacaggatgatgaaggagataacgcattccatatagcagca
gatgcagcaaagatgatacgtgaaaaccttgattggttaattgtgatgcttagaagtcct
gatgctgccatggacgtcagaaaccacagtggcaagacagtacgtgacttcttagaagcc
cttccaagagaatggatttcagaggatctgatggaggcactattgaaaaggggagttcat
ctatcacctacaatctatgaggtaggggattgggtgaagttcaagagaggcataacaaca
cccttacatggatggcaaggtgctaagcctaagagtgttgggtttgtgcaaaccattctc
gagaaggaggacatgattatcgcattttgttctggtgaagctcgtgtgttggcaaatgaa
gttgttaagttgattccattggacaggggccagcatgtaagactcagagcagatgtgaaa
gagccaaggtttggttggcgtggtcaatcacgtgatagtgtcggtactgttttatgtgtt
gatgaggatgggatcttacgagttgggtttcctggagcatctcgaggctggaaagctgat
cctgctgaaatggaacgcgtggaagagttcaaagtcggggactgggtccgtatccgtcag
aatctgacttcagcaaaacatggttttggatctgttgtccccgggagtatggggattgtt
tattgtgtaaggccagatagcagtctccttgtggagttaagttatcttccaaatccctgg
cattgtgaacccgaggaagttgaacctgttgctccctttaggattggtgatcgggtgtgc
gtaaagcggtcagttgctgaacctcgatatgcttggggtggggagacccatcacagtgtt
ggcaaaattagtgaaatagagaatgatggtctccttataattgaaataccaaaccgacct
ataccgtggcaggcagatccttcggacatggaaaagattgatgatttcaaggttggtgac
tgggtcagagtgaaggcgtcagtgtcttccccgaaatatggatgggaagacattactcga
aacagtattggcgttatgcacagcttagatgaagatggtgatgtgggtatagctttctgt
ttcaggagtaaacctttttcatgttctgtgacagatgttgaaaaggttacaccctttcat
gtgggacaagagattcatatgacaccatctataacccaaccacgacttggatggtcaaat
gagactccagcaactatcggtaaaataatgagaatcgatatggatgggactctgagtgca
caggtgactggtaaacagacgttgtggagagtctcacctggagatgcagagctgctctca
ggttttgaagttggtgattgggtgcgctcaaaaccaagcctgggaaacagaccaagctat
gattggtctaatgtaggaagggagagtattgctgtcgttcatagcatacaggaaacaggt
tacttagaattggcttgttgtttccggaaaggaagatggagtactcattacacagattta
gagaagattccagctctcaaagtgggccagtttgtgcatttccagaagggcttaacagaa
ccaagatggggctggagagcagccaagcccgattcacgaggcatcataaccacagttcat
gctgatggagaggtaagggttgctttctttggattgcctgggttgtggagaggagatcca
gccgacttggaagtggagcctatgtttgaggttggagaatgggtaagacttagagaaggt
gtttctagttggaaatttgttggaccaggaagtgttggtgtagtgcatggagtaggatat
gagggagacgagtgggatggaaccacttcggtttcattttgtggcgagcaagaaagatgg
gcggggcccacctcgcacctagagaaagcaaagaagcttgtggttggacaaaaaactcgg
gtcaaactggcagtgaaacagcctaggtttgggtggtcaggtcatagccatggaagtgta
ggaacaatagcagccattgatgcggatggtaagctacggatatacacaccggccggctct
aaaacgtggatgcttgacccatcagaagtggaaaccatagaagaagaagagctcaagatt
ggggactgggttagggttaaggcgagcatcacaacacccacttaccagtggggagaggtc
aatccttcaagcataggggtggttcacagaatggaggatggagacttatgggtatctttc
tgtttcctagacaggctatggctatgcaaagctggggaactggagcgcttaagaccattc
agaattggagaccgggttaagataaaggatggactggttacacctcggtggggttgggga
atggagacccatgcaagtaaaggacatgttgtgggagtggatgcaaatgggaaattgaga
ataaaattcctgtggagggaagggcggccatggattggtgatcctgctgatatcgttcta
gatgaaacttctggctaa
DBGET
integrated database retrieval system
