Arabidopsis lyrata (lyrate rockcress): 110228244
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Entry
110228244 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial 1-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110228244
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aly01007
]
110228244
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
110228244
Enzymes [BR:
aly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
110228244
Amino acid related enzymes [BR:
aly01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110228244
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110228244
Prokaryotic type
110228244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
110228244
NCBI-ProteinID:
XP_020880649
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MSESSEKQQILTEKELQRKKKNEDKVREKEIKEQKALEKAKLAEELKAKQEQDGTKSSKK
STKKSAKRFDSEENPEDFVDPETPLGEKKKLSPLMAKQYSPDAVEKSWCEWWEQSGFFKA
DAKSSKPAFVIILPPPNVTGILHTGHALTSAIEDTIIRWKRMSGFNALWVPATDHAGIAT
QVVVEKEIMAKRGLSRHDLGREEFVKEVWTWKNQSGDTIMTQLRRLGASLDWSRECFTMD
EQRSKAVTEAFVRLYKEGLIYRDNRIVNWDCSLRSAISKDEVTPIEIKGRTLLEVPGYEK
LVEFGFLTSFAYLLEDGSGEVVVATTRVETMLGDTAIAXYKHLHGKFVVHPFISGRKLPV
ICDEDLVDQNYGTACVKITPAMHDLDDFDVGKRHNLEFINIFTDDGKINTNGGPEFAGMP
RFTAREAVVEALKKKGLYRGAENNAMELKRCSRTKDVIEPMIKPQWYVNCHVMGKEALDV
AINDENKKLEFIQKQYTAEWRRWLEKIHDWCISRQLWWGHRIPAWYATLEEDQIKDFGSY
NDHWIVARNEKEAQKEVEHRFVGKKCELSQDPDVLDTWFSSGLSSLSNLGWPDETDELKA
FYPTSVLETGHGILFFWVARMVMLCMQLSGDVPFSKVYMHPMVCDAHGRKVSKSLGNGID
PLEVIKGETIAGLHRRLETSILDPKKLVAAKEGHAKDFPNGIPECGSDALRFALVSYTAQ
SDRINMDILRVIGYREWCNKLWNAVRFAMLKLGDGYTPLLTLCPETMPLSCQWILSSLNK
VISKTVDSLNAYEFSNAANAVYAWWQYQLCDVYIEAIKPYFNKPEYSLERTHAQHALWVC
LETGLRLLHPFLPFVTEELWQRLPWPKDCERKASIMICDYPSPIENWRNEKAETEMDMIL
MTVKYLRAKRAELLEKQRKERLHAFALCENELMLKIVQTHELEITTLANLSSLEVELKGG
EEQAALLARTAFETINENLKVYIKVDEAIDAEAESEKIRNKIEELQKQKEKMEKIMGASE
YEEKVPANIKEDNTTKLAKLLQEFDFFNNIYSKTLIRMSHIAWD
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcatcggagaagcagcagatcctcaccgagaaggaactccaacggaagaaa
aagaatgaagacaaggttcgagaaaaggaaataaaggagcaaaaagctttggagaaagca
aaattagctgaagaacttaaggcaaaacaagaacaagatggaaccaaatcttctaaaaag
agtacaaagaagagtgctaaaagatttgattcagaagagaatcctgaggattttgttgat
ccagagactcctcttggtgagaagaaaaagttatctccacttatggctaaacaatacagt
cctgacgctgttgaaaaatcatggtgtgaatggtgggagcaatctggcttttttaaggct
gatgctaagagttccaaaccagcttttgttattattctgcctcctccaaatgtgactgga
attttgcatactgggcacgcattaacatcagccatagaggacacgattattcgttggaag
agaatgtctggttttaatgcgttgtgggttcccgctactgaccatgccggtatagctaca
caggttgtggttgagaaagagatcatggctaaaagaggattgagtagacatgaccttggc
cgagaagaattcgttaaggaagtatggacgtggaagaaccagtctggtgatacaatcatg
acacaactacggcgtttaggtgcttctcttgattggtctcgtgagtgttttacaatggat
gagcaaagatcaaaagctgtcactgaggcttttgttcggttatacaaggaagggcttatc
tatagagataataggattgttaattgggattgtagtttaagatcagccatatctaaagat
gaggttactcctattgagatcaaaggaaggacactgttagaagtacctggatatgagaag
ctagtggaatttggttttcttacttcatttgcttaccttctcgaggatggttcgggagag
gttgttgtagccaccacgagagtggaaacaatgcttggtgatactgccattgctnngtac
aagcatcttcacggaaagtttgtggtgcatccgtttattagtggacggaagttaccagtt
atctgcgatgaagatctcgttgatcaaaactatggtactgcttgtgttaagattactcct
gctatgcatgatcttgatgatttcgatgtcggaaagcgccacaatcttgaatttataaac
atattcactgatgatggaaagatcaatacaaatggcgggcctgagttcgcgggaatgcca
cgctttacggcccgtgaagcggttgttgaagctctgaagaagaagggattgtacagaggt
gccgaaaacaacgcaatggaacttaaacgttgttcaagaactaaagatgttattgagcct
atgataaagcctcagtggtacgtgaattgtcatgtgatgggaaaggaagctcttgatgtt
gctatcaatgatgaaaacaagaagctagagtttatacaaaagcagtacacagcagaatgg
agaagatggctagagaagatacatgactggtgcatttcgagacagctttggtggggacat
agaataccagcatggtatgcaactctagaagaagatcaaattaaagattttggttcttac
aatgaccattggatcgttgctagaaacgagaaagaagctcaaaaagaagttgaacataga
tttgtcgggaagaaatgcgagctctctcaagatcctgatgtgcttgacacatggttttct
tcagggctctcttcgttatcgaatttgggatggccagatgaaactgatgagttaaaagct
ttctatccaacttctgttcttgaaactggtcatggcattctcttcttttgggttgctcgc
atggttatgctatgtatgcaactttctggtgatgttccctttagcaaggtttatatgcat
cctatggtatgtgatgcacatggacgaaaggtgtcaaagtctcttggaaatggcattgat
ccgcttgaagtcattaaaggtgaaactattgcgggtcttcataggaggttagagaccagt
atcttagatccaaagaagcttgttgctgctaaagaaggacatgccaaggattttccaaat
ggtatccctgaatgtggttccgatgctcttcgatttgcacttgtatcctacacagctcag
tctgatagaataaatatggatatcctccgagtgattggttaccgtgaatggtgtaataag
ctctggaatgcggtgagatttgcgatgctgaagcttggtgatggttatacacctttgcta
actctatgtcctgaaaccatgccattgagctgccaatggattctttcgtcactaaataag
gtgatatcaaagacggttgattcgttgaatgcttacgagttttcgaatgcagccaacgcg
gtatacgcttggtggcaataccaactttgtgatgtatacattgaagcaatcaagccttat
tttaacaaaccagaatattctttagagaggactcatgcacaacatgctctatgggtttgt
ctagagactggtttgagattgcttcacccgtttctgccttttgtaaccgaagagctttgg
caacgattaccttggcctaaagattgtgaacggaaagcgtctatcatgatatgtgactac
ccatctcccattgagaactggagaaacgaaaaggcggaaaccgaaatggacatgattctg
atgactgtgaaatatctcagagcaaagagagcagagttgttagagaaacagagaaaagaa
aggttgcatgcatttgctctgtgtgaaaacgagttaatgttaaagattgtacagacccat
gagttagagatcacaacccttgcaaatctctcatccttagaggttgaactaaaaggagga
gaagaacaagcagccttattagctagaacagcctttgaaacgattaacgagaacctcaag
gtttatatcaaagtggatgaagccattgatgcagaagctgaaagtgaaaagatcagaaac
aagattgaggagctgcagaaacaaaaggagaagatggagaagattatgggcgctagtgag
tacgaagagaaagtacctgccaacattaaggaagacaacaccacgaagctcgccaaactt
cttcaagaattcgactttttcaacaatatttattcaaagacccttattagaatgtcccac
attgcttgggattaa
DBGET
integrated database retrieval system
