KEGG   Arabidopsis lyrata (lyrate rockcress): 110228350
Entry
110228350         CDS       T01578                                 
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B AAA_30 AAA_19 Viral_helicase1 DEAD AAA_22 AAA ResIII nSTAND3 UvrD-helicase AAA_16 AAA_25 RuvB_N PhoH PIF1 AAA_33 SRP54 AAA_7 Zot NPHP3_N SLFN-g3_helicase IstB_IS21 DUF2786 TsaE PspAA
Other DBs
NCBI-GeneID: 110228350
NCBI-ProteinID: XP_020881183
LinkDB
Position
Unknown
AA seq 643 aa
MSKKQGSAMSLEAFVSTMAPLIDMEKEAEISMSLSTGASRNIETAQKKGTTILNLKCVDV
QAGLMGKSLIEFQSNKGDVLPAHKFGNHDVVVLKLNKSDLGSSPLAQGVVYRLKDSSITV
VFDEIPEEGLNTSLRLEKLANEVTYRRMKDTLIQLSKGVLRGPASDLVPVLFGERQPSVS
KKAVKSFTPFNKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKI
LTCAASNIAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRK
EMKALNGKLLKAKDKNTRREIQKELRTLGKEERKRQQLSVSDVIKNSDVILTTLTGALTR
KLDNRTFDLVIIDEGAQALEVACWIALLKGSRCILAGDHLQLPPTIQSAEAERKGLGRTL
FERLADLYGDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSS
STEATLLLVDTAGCDMEEKKDEEESTYNEGEAGVAMAHAKRLMESGVQPSDIGIITPYAA
QVMLLRILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAV
TRSRRQCCIVCDTETVSSDAFLKRMIEYFEEHGEYLSASEYTN
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgtcgaagaagcaaggatctgcgatgtctcttgaagcttttgtgtcaacaatggctcca
cttatagatatggagaaagaagctgagatctcaatgtctttaagcactggtgcttcaagg
aacattgaaactgctcagaagaaaggcacaacgattctcaatttgaaatgtgttgatgtt
caagcaggtctcatgggcaaatctcttattgagtttcaatctaacaaaggagatgttctt
cctgctcacaagtttggtaaccatgatgttgttgtgttgaaacttaacaaatctgatctt
ggttcgtctcctcttgcacaaggagttgtttaccggttgaaagattcttcgattactgtt
gtgtttgatgagatccctgaagaagggttaaacacttctcttcggttggagaaacttgcg
aatgaggtgacgtaccgtaggatgaaagatacgttgatacagctgagtaaaggtgtgtta
agaggacctgcttctgatttagtgcctgtcttgtttggtgagagacaaccatcagtgtcg
aagaaggctgttaagtcctttacgccttttaacaagaaccttgatcaatcgcagaaagat
gcgattacaaaggctttatcttcaaaggatgtgtttttgctacatggtcctcctggtact
gggaagacaacgacagtggtggaaatagtcttgcaagaagttaaacgcggttcaaagatt
cttacttgtgctgcttcgaatattgcagttgataatattgttgaaagacttgttcctcat
aaagttaagctggtgagggtgggacatcctgctcggcttttacctcaagtgttggatagt
gctctagatgctcaggttctaaagggagataacagcggtctagcaaatgatatcagaaag
gaaatgaaagcactaaatgggaagttgttgaaagcgaaagataaaaacacaaggagagaa
atccagaaggagcttcgaactctaggtaaggaagagcgtaaaaggcagcaattatctgta
tcagatgtgatcaagaattctgatgtcattctcacaactttgactggtgcattaacacga
aagctcgataatagaacttttgacttggtgatcattgatgaaggagcacaggctcttgag
gtagcatgctggatagctctgctaaaggggtcaagatgtatacttgcaggagaccatctc
caactcccaccgacaatccaaagtgctgaagctgaaaggaaaggattagggagaacactc
tttgaacggctagcggatctttatggagatgagatcaagtccatgcttactgtccagtat
cgtatgcatgagcttataatgaactggtcatcaaaagagctttacgataacaagataaca
gcgcattcaagtgttgcctcacacatgctttttgacttggagaatgtaacaaaatcttct
tcaacagaggcgactctactattagtagatactgctgggtgtgacatggaagagaagaaa
gatgaggaagagagcacctataacgaaggtgaagcaggggttgcaatggcacatgccaag
agactaatggagagtggagttcagccttctgatattggaattattacgccttacgctgct
caggttatgctgcttaggattcttaggggcaaagaggagaagcttaaggacatggagatc
tctacggtggatggtttccaaggtcgagagaaagaagcaatcatcatttccatggttcga
tcaaactcgaagaaagaggttggatttttaaaggaccaaaggcgaatgaatgtggctgtt
actcgctctagaagacagtgttgtatcgtctgcgatacagagacagtgagcagtgatgcg
tttctgaaacgtatgattgaatactttgaggagcatggcgagtatctcagtgcctctgag
tacaccaactag

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