Arabidopsis lyrata (lyrate rockcress): 110228990
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Entry
110228990 CDS
T01578
Name
(RefSeq) DNA repair protein XRCC3 homolog
KO
K10880
DNA-repair protein XRCC3
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110228990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
110228990
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
110228990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
DnaB_C
Motif
Other DBs
NCBI-GeneID:
110228990
NCBI-ProteinID:
XP_020883265
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MQNGKMKPENLSRRSATSRKLTTGCEILDGCIRGGISCDSLTEIVAESGCGKTQLCLQLS
LCAQLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHSFHQSNPSIYANHNDNPCDHVFVQN
VHSVDHLFDIMPRIDGFVGNSKNRLPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKI
SGKLKQLANKFDLAVVITNQVTDFVESSDGLSGLRIGNLRYLYSSGRRVVPALGLAWANC
VNSRFFISRSDDIIGKDRSAKDESGSSSVSRRAQRRLDIVFSPYLPGNSCEFMITREGIC
AVQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgggaaaatgaagccggaaaatctctcccgtcgatcggcgacgagtcgcaaa
ctaaccaccggctgtgaaatcctcgacggatgtattcgcggcggaatttcctgcgattct
ttaactgaaatcgtggcggagagtggctgtgggaagacacagctctgtcttcagctatca
ctctgtgcccagcttccgatttcacacggcggactcaacggttcttctctttatctccac
tccgagtttccatttccgtttcgacgtcttcatcagctctcgcattcgtttcatcaatca
aaccctagtatttacgcgaatcacaatgataatccttgtgaccatgtgttcgtacaaaat
gttcattctgtagaccacctgttcgacataatgcctaggattgatgggtttgttgggaat
tcgaaaaatcggcttcctttgaagttgattgtgcttgattctgtagcggcattgtttaga
tcggaatttgataatactccgtctgatcttaagaagagatcttctttgtttttcaagata
tcagggaaattgaagcagttggcaaataagtttgatttggctgttgtgattacgaatcag
gttacggatttcgttgaatcttctgatgggttaagtgggttgaggattgggaatttgagg
tatttgtattcgtctgggagacgagttgttcctgctttaggcttggcttgggccaattgc
gtgaattctagattttttatttcacgaagtgatgatattattggtaaagatagaagcgca
aaggacgagagcggttcaagttctgtgtccagaagagctcagagacggcttgacattgtt
ttttcaccttatttgcctgggaattcttgcgagttcatgatcacaagagaagggatttgt
gcggttcaagcgtag
DBGET
integrated database retrieval system