Arabidopsis lyrata (lyrate rockcress): 110229018
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Entry
110229018 CDS
T01578
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110229018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
110229018
Spliceosome [BR:
aly03041
]
Common components
Common spliceosomal components
SR proteins
110229018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_5
zf-CCHC_2
CLIP1_ZNF
zf-CCHC_3
C_Hendra
Motif
Other DBs
NCBI-GeneID:
110229018
NCBI-ProteinID:
XP_020883378
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA
RHYLDGRDFDGSRITVEFSRGAPRGSRDYDSRGPPPGAGRCFNCGVDGHWARDCTAGDWK
NKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRIPSQSLSRSRSYSRSRS
PVRRRERSVEERSRSPKRMDDSLSPRVRDRSPVLDDEGSPKIIDGSPPPSPKLQKEDGSD
RDGGSPQDNGNGRNSVVSPVVGAGGDSLKEDQSPIDDDYEPNRASPRGSESP
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctacgatgatcgctatgggaacactcgtctttatgttggccgcttgtcatcc
agaactaggacccgagaccttgaacgtctttttagcagatacggaagagtgcgagatgtg
gatatgaagcgagattatgcttttgttgaatttggtgatccccgtgatgctgatgatgcg
agacattacttggacgggcgagactttgatggaagtcgcatcactgtggagttttcaaga
ggggcacctcgtggttctcgagattatgatagcagaggcccacctcctggagctggtcgc
tgttttaactgtggtgttgacggtcattgggctcgggactgcacggcaggggactggaag
aacaagtgttaccgttgtggagagagaggacacattgagagaaactgcaaaaacagcccc
aagaagcttaggcggagtggaagctactccaggtcacctgtaagatcccgttctcctcgt
cgtagaagaatcccaagccagagtcttagccgaagccgaagctacagccgatcacgatcc
ccggtgagaagaagagagaggagtgtggaggagagatcacgcagtcctaagcgaatggat
gactctctatcgccaagagtcagagatcgtagtccggttcttgatgatgaaggcagccca
aagatcatagacgggagcccgccaccatcaccaaagcttcaaaaggaagacggatcagac
cgtgacggtggtagcccccaagacaatggaaatggcagaaactctgttgtcagtcctgtt
gtaggagccggcggtgacagcctgaaagaggaccagagccctattgatgatgattacgag
ccaaaccgtgcttcccctagaggaagcgagtccccttaa
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