Arabidopsis lyrata (lyrate rockcress): 110229446
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Entry
110229446 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC25 homolog
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
110229446
Spliceosome [BR:
aly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110229446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CWC25
Cir_N
DUF3417
Motif
Other DBs
NCBI-GeneID:
110229446
NCBI-ProteinID:
XP_020885314
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MGMKFLNKKGWHTGSLRNIETVWKAEQKQEAEQKKLEELRLQILQERERSEFRALQEQAG
LIPRQERLEFLYDSGLAVGKGSASGSGVSFQKEEQPLAKAEAGNSASEKPDQSAPGALFE
EKAQSANDSWRKLHSDPLLLIRQREQEALAKIKNNPVKMALIRKSVEEKGKGKDGDTKEH
KKKHKRKSGKHHKQSSSRQPSDSEEDSGEEYNRRKSHHQKTSGTHDXRESHDRHYERRRS
ELDDEFKRRESHGTHYERRMSELDDESKRRESRDKHYERQRSDLDDESKRRESLDKHYER
RRSDLDDESKRRESQDKRRRSDIDDEPKRRDSHRETRPNEKYRNHSPKGGVERENLKSYG
QEDKKRKTEDLDNGKHPSRENEYQNRRRKGGSKLSEEERAARLKQMQMDAEVHEEQRWRR
LKKADDTDAVEADKNKVTTGKSFLDDANKSVYGIEKGGSSTIEESVRRRSYYSQRGTAAE
GNAFRR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaaatttctgaacaagaagggatggcatacggggagtctccgtaacatcgag
accgtatggaaggctgagcaaaaacaagaagccgagcagaaaaagctcgaggagcttcgt
ctccagatcttgcaggagagggagcgttctgagtttcgtgctctccaggaacaagccggt
ctcatcccgagacaggagagattggagtttctgtatgattcaggattagctgtagggaag
ggaagtgcgagtggttcaggtgtttcgtttcagaaagaagagcagcctttagccaaagct
gaagccggtaatagtgccagtgagaagccagatcagtctgctcctggtgcgctgtttgag
gagaaggcgcaatctgctaatgattcgtggaggaaacttcactctgatcctttgcttctc
atcaggcagcgtgagcaggaagctcttgccaaaatcaagaataatcctgtcaaaatggct
cttattcgcaaatcggtagaagaaaaaggaaagggtaaagatggagacacaaaggagcac
aagaaaaagcataagcgtaaaagtggaaagcatcacaagcaatcttcatccaggcagcca
tctgattcggaggaagattctggtgaagagtataacagaagaaaatctcaccatcagaaa
acgtcagggactcatgacngaagagaaagtcatgataggcactatgagagacgaaggtca
gaactagatgatgagttcaaaagaagagaaagtcatggtacgcactatgagagacgaatg
tcagaattggatgatgagtcaaaaagaagagaaagtagggataagcactatgagagacaa
aggtcagatttggatgatgagtccaaaagaagagaaagtcttgataagcactatgagaga
cgaaggtcggatttggatgatgagtccaaaagaagagaaagtcaagataagagacgaagg
tcagatattgatgatgaaccaaaaagaagagatagtcatagagaaactcggccgaatgag
aaatatcggaatcactcccctaaaggcggtgtggaaagggaaaatcttaagagttatggt
caagaggataaaaagaggaaaacagaagatttagacaatggaaagcatccctcaagggag
aatgaatatcagaatagacgccggaaaggtggctctaagctatcagaagaagaaagagct
gctagattaaagcaaatgcaaatggatgcagaggtgcatgaggagcaaagatggagaaga
ttgaagaaagcagatgacactgatgcagtggaagcagataagaacaaagtaaccacgggc
aaaagctttttggacgatgctaataaaagtgtgtacggaattgagaaaggcgggagctca
acaattgaagaaagtgttcgtcgcagaagctattattcacaacgtggaactgcagctgaa
ggcaatgcgtttcgtcgctga
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